RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 LILRA4P59901 499 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 EML3Q32P44 896 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 WDR93Q6P2C0 686 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 CRIPAKQ8N1N5 446 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 C3orf20Q8ND61 904 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 GAD1Q99259 594 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 FTHL17Q9BXU8 183 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 MRPL47Q9HD33 250 aaKnown RBP13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 SCINQ9Y6U3 715 aa13.1□□□□□ -0.31
TNFAIP3-211ENST00000621150 MYO7AQ13402 2215 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 FNDC1Q4ZHG4 1894 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 ARL5CA6NH57 179 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 H3BNC9 293 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 MAN1A1P33908 653 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 MLH1P40692 756 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 SLC1A1P43005 524 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 TAF6P49848 677 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 ZNF252P-AS1Q0IIN9 211 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 STILQ15468 1287 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 CCDC181Q5TID7 509 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 ARHGAP17Q68EM7 881 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 LYPD8Q6UX82 237 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 HACE1Q8IYU2 909 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 CRYBG2Q8N1P7 616 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 FIBCD1Q8N539 461 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 FEZF2Q8TBJ5 459 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 LPPQ93052 612 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 ZNF689Q96CS4 500 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 CPXM1Q96SM3 734 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 UHRF1Q96T88 793 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 SELENOOQ9BVL4 669 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 SLC38A7Q9NVC3 462 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 PARVAQ9NVD7 372 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 TJP2Q9UDY2 1190 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 L1RE1Q9UN81 338 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 TMA7Q9Y2S6 64 aaKnown RBP13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 CEP83Q9Y592 693 aa13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 DNMT3AQ9Y6K1 912 aaPredicted RBP13.09□□□□□ -0.31
TNFAIP3-211ENST00000621150 CCDC66A2RUB6 948 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 BHMG1C9JSJ3 638 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 PGRMC1O00264 195 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 GABRDO14764 452 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 CEP104O60308 925 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 DGKIO75912 1065 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 TUBBP07437 444 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 RHOXF2BP0C7M4 288 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 WARSP23381 471 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 IGFBP6P24592 240 aaPredicted RBP13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 RBM10P98175 930 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 GPM6BQ13491 265 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 SV2CQ496J9 727 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 PHLDB2Q86SQ0 1253 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 ERICH1Q86X53 443 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 TOP6BLQ8N6T0 577 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 MRPL38Q96DV4 380 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 HEXIM2Q96MH2 286 aaKnown RBP13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 RHOXF2Q9BQY4 288 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 ZNF446Q9NWS9 450 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 SEPT3Q9UH03 358 aa13.08□□□□□ -0.32
TNFAIP3-211ENST00000621150 CCDC151A5D8V7 595 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 C9IYK1 514 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 MYO1FO00160 1098 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 GJB6O95452 261 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 THP07101 528 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 RPL7AP62424 266 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 VSNL1P62760 191 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 FAM189BP81408 668 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 OGDHQ02218 1023 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 PDCLQ13371 301 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 BRD3Q15059 726 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 XYLT1Q86Y38 959 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 ECHDC2Q86YB7 292 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 SIX5Q8N196 739 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 PDCL2Q8N4E4 241 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 NIPA2Q8N8Q9 360 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 C12orf29Q8N999 325 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 HNRNPLLQ8WVV9 542 aaKnown RBP13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 RUBCNQ92622 972 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 MCRS1Q96EZ8 462 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 NECAB3Q96P71 396 aaPredicted RBP13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 ADAM2Q99965 735 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 LRRC1Q9BTT6 524 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 RGS18Q9NS28 235 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 TSPAN16Q9UKR8 245 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 STRIP2Q9ULQ0 834 aa13.07□□□□□ -0.32
TNFAIP3-211ENST00000621150 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.06□□□□□ -0.32
TNFAIP3-211ENST00000621150 SIGLEC16A6NMB1 481 aa13.06□□□□□ -0.32
TNFAIP3-211ENST00000621150 TMEM110-MUSTN1A8MSY1 372 aa13.06□□□□□ -0.32
TNFAIP3-211ENST00000621150 C5orf67F2Z3F1 127 aa13.06□□□□□ -0.32
TNFAIP3-211ENST00000621150 M0QYV0 167 aa13.06□□□□□ -0.32
TNFAIP3-211ENST00000621150 HCRTO43612 131 aa13.06□□□□□ -0.32
TNFAIP3-211ENST00000621150 ERBB2P04626 1255 aa13.06□□□□□ -0.32
TNFAIP3-211ENST00000621150 CTNNB1P35222 781 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms