RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 SNX30Q5VWJ9 437 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 MON1BQ7L1V2 547 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 UTP4Q969X6 686 aaKnown RBP11.17□□□□□ -0.62
CDH1-214ENST00000621016 SERPINB12Q96P63 405 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 SENP7Q9BQF6 1050 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 R3HDMLQ9H3Y0 253 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 TRABDQ9H4I3 376 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 POLIQ9UNA4 740 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 PDE5AO76074 875 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 C4BPAP04003 597 aaKnown RBP11.17□□□□□ -0.62
CDH1-214ENST00000621016 PGK2P07205 417 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 CCDC166P0CW27 439 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 PSMA2P25787 234 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 CYTH1Q15438 398 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 WDR72Q3MJ13 1102 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 FAXCQ5TGI0 409 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 SCYL2Q6P3W7 929 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 FAM83AQ86UY5 434 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 ZNF280CQ8ND82 737 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 CYTH2Q99418 400 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 PARVAQ9NVD7 372 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 CROTQ9UKG9 612 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 ATP9BO43861 1147 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 CST8O60676 142 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 OXSR1O95747 527 aaPredicted RBP11.17□□□□□ -0.62
CDH1-214ENST00000621016 PENKP01210 267 aaPredicted RBP11.17□□□□□ -0.62
CDH1-214ENST00000621016 KRT4P19013 534 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 RFC1P35251 1148 aaPredicted RBP11.17□□□□□ -0.62
CDH1-214ENST00000621016 TMED10P49755 219 aaKnown RBP11.17□□□□□ -0.62
CDH1-214ENST00000621016 HPCAP84074 193 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 PTK6Q13882 451 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 XKR3Q5GH77 459 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 IRGCQ6NXR0 463 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 ARHGEF18Q6ZSZ5 1173 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 TFAP2BQ92481 460 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 VTI1AQ96AJ9 217 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 IFT43Q96FT9 208 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 GINM1Q9NU53 330 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 ATAD3AQ9NVI7 634 aa11.17□□□□□ -0.62
CDH1-214ENST00000621016 ADCY3O60266 1144 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 LYPLA2O95372 231 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 STAMBPO95630 424 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 TMEM191BP0C7N4 346 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 SKIP12755 728 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 ATP5DP30049 168 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 GDF10P55107 478 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 WDR4P57081 412 aaKnown RBP11.16□□□□□ -0.62
CDH1-214ENST00000621016 TFDP1Q14186 410 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 FXNQ16595 210 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 SH2D4BQ5SQS7 431 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 FAM71DQ8N9W8 422 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 SREK1Q8WXA9 508 aaKnown RBP11.16□□□□□ -0.62
CDH1-214ENST00000621016 P3H4Q92791 437 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 CENPTQ96BT3 561 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 TEPSINQ96N21 525 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 SMC6Q96SB8 1091 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 NPHS2Q9NP85 383 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 CISHQ9NSE2 258 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 CYP39A1Q9NYL5 469 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 A0A0G2JND7 137 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 B4GALT5O43286 388 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 MTA2O94776 668 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 CBX6O95503 412 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 GSTA1P08263 222 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 VAV1P15498 845 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 ARFIP2P53365 341 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 IL9RQ01113 521 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 CENPCQ03188 943 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 LSAMPQ13449 338 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 TNFAIP1Q13829 316 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 CCNG2Q16589 344 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 UBA3Q8TBC4 463 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 RSAD2Q8WXG1 361 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 ROPN1BQ9BZX4 212 aaPredicted RBP11.16□□□□□ -0.62
CDH1-214ENST00000621016 ROPN1Q9HAT0 212 aaPredicted RBP11.16□□□□□ -0.62
CDH1-214ENST00000621016 LY75O60449 1722 aa11.16□□□□□ -0.62
CDH1-214ENST00000621016 C2orf71A6NGG8 1288 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 FAM47DPA6NHR8 397 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 DKC1O60832 514 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDH1-214ENST00000621016 AVILO75366 819 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ACO1P21399 889 aaKnown RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 SLC1A1P43005 524 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 KPNA1P52294 538 aaPredicted RBP11.15□□□□□ -0.62
CDH1-214ENST00000621016 TMEM63BQ5T3F8 832 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ANKRD22Q5VYY1 191 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 C3orf62Q6ZUJ4 267 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 SATL1Q86VE3 508 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 CTAGE3PQ8IX95 158 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 PALM2Q8IXS6 379 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 SAMD3Q8N6K7 520 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 NETO2Q8NC67 525 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 FAM13CQ8NE31 585 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 JOSD2Q8TAC2 188 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 PYROXD1Q8WU10 500 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 FBXL18Q96ME1 805 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 CEP44Q9C0F1 390 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 KIAA1586Q9HCI6 787 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
CDH1-214ENST00000621016 ARL2BPQ9Y2Y0 163 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms