RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 TMEM39AQ9NV64 488 aa12.77□□□□□ -0.37
GTF2I-218ENST00000620879 RBPJLQ9UBG7 517 aa12.77□□□□□ -0.37
GTF2I-218ENST00000620879 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
GTF2I-218ENST00000620879 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.37
GTF2I-218ENST00000620879 PLIN4Q96Q06 1357 aa12.77□□□□□ -0.37
GTF2I-218ENST00000620879 LYPLA2O95372 231 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 KRT33BQ14525 404 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 USP10Q14694 798 aaKnown RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 C15orf59Q2T9L4 293 aaPredicted RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 DDX53Q86TM3 631 aaKnown RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 LMNTD2Q8IXW0 634 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 ZSWIM2Q8NEG5 633 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 LNX1Q8TBB1 728 aaPredicted RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 ACTRT1Q8TDG2 376 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 APBA2Q99767 749 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 FUT8Q9BYC5 575 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 GOLGA2P5Q9HBQ8 144 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 RGPD5Q99666 1765 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 RARAP10276 462 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 RFC1P35251 1148 aaPredicted RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 PTK7Q13308 1070 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 ART3Q13508 389 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 BTG3Q14201 252 aaPredicted RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 NBPF20Q3BBV1 942 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 TFAP2DQ7Z6R9 452 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 PPIL6Q8IXY8 311 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 ST3GAL5Q9UNP4 418 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 APOBEC2Q9Y235 224 aaKnown RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 RPS6KL1Q9Y6S9 549 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 TMEM120BA0PK00 339 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 LRG1P02750 347 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 URODP06132 367 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 SETSIPP0DME0 302 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 MIPP30301 263 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 PRKCIP41743 596 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 SNX17Q15036 470 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 KIF19Q2TAC6 998 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 ARL8AQ96BM9 186 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 BCAP29Q9UHQ4 241 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 ATRNL1Q5VV63 1379 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 SNED1Q8TER0 1413 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 F9P00740 461 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 AGTP01019 485 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 HSPA9P38646 679 aaKnown RBP12.76□□□□□ -0.37
GTF2I-218ENST00000620879 FAM136AQ96C01 138 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 ULK4Q96C45 1275 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 VIPAS39Q9H9C1 493 aa12.76□□□□□ -0.37
GTF2I-218ENST00000620879 H0Y3Z8 333 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 TREHO43280 583 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 DNAJC6O75061 913 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 CHEK2O96017 543 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 AMPD1P23109 780 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 WEE1P30291 646 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 MARCKSL1P49006 195 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 ARFIP2P53365 341 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 NCKAP1LP55160 1127 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 PPHLN1Q8NEY8 458 aaKnown RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 SHISA4Q96DD7 197 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 LRRC37BQ96QE4 947 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 DDX50Q9BQ39 737 aaKnown RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 ULBP1Q9BZM6 244 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 VCXQ9H320 206 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 PABPC3Q9H361 631 aaKnown RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 SEMA4AQ9H3S1 761 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 WRAP73Q9P2S5 460 aaPredicted RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 A0A0B4J269 797 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 CDH18Q13634 790 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 BMT2Q1RMZ1 405 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 FAM71AQ8IYT1 594 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 EPS8L3Q8TE67 593 aaKnown RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 SGF29Q96ES7 293 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 PSMC3IPQ9P2W1 217 aaPredicted RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 TOPAZ1Q8N9V7 1692 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 KNL1Q8NG31 2342 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 NVLO15381 856 aaKnown RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 PPFIA2O75334 1257 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 USP17L7P0C7H9 530 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 GFAPP14136 432 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 RPL7AP62424 266 aaKnown RBP12.75□□□□□ -0.37
GTF2I-218ENST00000620879 IRF2BP2Q7Z5L9 587 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 CREG2Q8IUH2 290 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 XPNPEP1Q9NQW7 623 aa12.75□□□□□ -0.37
GTF2I-218ENST00000620879 H0Y626 953 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 MBL2P11226 248 aaPredicted RBP12.74□□□□□ -0.37
GTF2I-218ENST00000620879 HIRAP54198 1017 aaPredicted RBP12.74□□□□□ -0.37
GTF2I-218ENST00000620879 C11orf63Q6NUN7 778 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 LENG9Q96B70 501 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 FGD4Q96M96 766 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 ZFP42Q96MM3 310 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 ANKZF1Q9H8Y5 726 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 CHST7Q9NS84 486 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 SLC30A1Q9Y6M5 507 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 CST3P01034 146 aaPredicted RBP12.74□□□□□ -0.37
GTF2I-218ENST00000620879 POLBP06746 335 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 AXLP30530 894 aa12.74□□□□□ -0.37
GTF2I-218ENST00000620879 SLC11A2P49281 568 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms