RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 PPP1R12CQ9BZL4 782 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 DDX43Q9NXZ2 648 aaKnown RBP20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 KCNK4Q9NYG8 393 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 SLC9A2Q9UBY0 812 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 PLA2G4CQ9UP65 541 aa20.44■□□□□ 0.86
PDLIM3-212ENST00000620787 EIF4BP23588 611 aaKnown RBP20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 CCND2P30279 289 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 EIF3EP60228 445 aaKnown RBP20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 IMPG2Q9BZV3 1241 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 CISHQ9NSE2 258 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 FBXO40Q9UH90 709 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 ANGPTL2Q9UKU9 493 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 PCDHGC3Q9UN70 934 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 ONECUT3O60422 494 aaPredicted RBP20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 ENO1P06733 434 aaKnown RBP20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 TGFB2P61812 414 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 GSTA3Q16772 222 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 STYK1Q6J9G0 422 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 MTHFD1LQ6UB35 978 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 NET1Q7Z628 596 aaPredicted RBP20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 RBM15BQ8NDT2 890 aaKnown RBP20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 TJP2Q9UDY2 1190 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 PPME1Q9Y570 386 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
PDLIM3-212ENST00000620787 COPEO14579 308 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 FAM155BO75949 473 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 RGS20O76081 388 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 C1QAP02745 245 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 NR3C2P08235 984 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 YWHAGP61981 247 aaKnown RBP eCLIP20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 CES4AQ5XG92 561 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 XRRA1Q6P2D8 792 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 PRPF39Q86UA1 669 aaKnown RBP20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 C7orf26Q96N11 449 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 MECRQ9BV79 373 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 KLHL33A6NCF5 533 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 LRRIQ4A6NIV6 560 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 APOC4-APOC2K7ER74 178 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 K7ERI5 159 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 APOC2P02655 101 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 ANPEPP15144 967 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 BAATQ14032 418 aaPredicted RBP20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 KCNJ11Q14654 390 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 PTPN20Q4JDL3 420 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 RFX6Q8HWS3 928 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 SCUBE1Q8IWY4 988 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 LPAR1Q92633 364 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 PANX3Q96QZ0 392 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 JPH1Q9HDC5 661 aaPredicted RBP20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 ETAA1Q9NY74 926 aa20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 CPSF2Q9P2I0 782 aaKnown RBP20.42■□□□□ 0.86
PDLIM3-212ENST00000620787 TRIM49D1C9J1S8 452 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 MYL6P60660 151 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 ACTR2P61160 394 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 BST1Q10588 318 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 HADHQ16836 314 aaKnown RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 TTC39BQ5VTQ0 682 aaPredicted RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 DENND1BQ6P3S1 775 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 RSBN1LQ6PCB5 846 aaPredicted RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 ABHD15Q6UXT9 468 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 RIPOR1Q6ZS17 1223 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 MYLK4Q86YV6 388 aaPredicted RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 DEPTORQ8TB45 409 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 FGD4Q96M96 766 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 NR1H4Q96RI1 486 aaPredicted RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 PNPLA8Q9NP80 782 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 PDP2Q9P2J9 529 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 PGAP2Q9UHJ9 254 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 KCNG1Q9UIX4 513 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 TTLL3Q9Y4R7 772 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 SPAG6O75602 509 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 TM7SF2O76062 418 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 ATG7O95352 703 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 RBP3P10745 1247 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 KRT3P12035 628 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 HARSP12081 509 aaKnown RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 NAMPTP43490 491 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 SYCP2LQ5T4T6 812 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 SLC26A11Q86WA9 606 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 SMC1BQ8NDV3 1235 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 CLPTM1LQ96KA5 538 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 NIF3L1Q9GZT8 377 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 IQCGQ9H095 443 aaKnown RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 PORCNQ9H237 461 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 PPARGC1AQ9UBK2 798 aaKnown RBP20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 CYTH4Q9UIA0 394 aa20.41■□□□□ 0.86
PDLIM3-212ENST00000620787 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 H0YIN7 160 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 I3L4J1 428 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 MCF2LO15068 1137 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 MAFGO15525 162 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 AVILO75366 819 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 WEE2P0C1S8 567 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 UBTFL6P0CB48 400 aaPredicted RBP20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 TAF5Q15542 800 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 TRMT5Q32P41 509 aaKnown RBP20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 XKR3Q5GH77 459 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 MDH1BQ5I0G3 518 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 CCNJLQ8IV13 435 aa20.4■□□□□ 0.86
PDLIM3-212ENST00000620787 ULK2Q8IYT8 1036 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms