RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 DDX3XO00571 662 aaKnown RBP eCLIP14.39□□□□□ -0.112e-8■□□□□ 8.3
NEK3-210ENST00000620675 XPO1O14980 1071 aaKnown RBP14.39□□□□□ -0.11
NEK3-210ENST00000620675 MED7O43513 233 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 TADA3O75528 432 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 PAPLNO95428 1278 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 HNRNPA1P09651 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
NEK3-210ENST00000620675 ANXA13P27216 316 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 HNRNPH3P31942 346 aaKnown RBP14.39□□□□□ -0.11
NEK3-210ENST00000620675 PLA2G4AP47712 749 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 NOMO3P69849 1222 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 PTPN20Q4JDL3 420 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 NAA35Q5VZE5 725 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 GAREM2Q75VX8 874 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 GPR149Q86SP6 731 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 HLA-CQ95604 372 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 IQCDQ96DY2 449 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 SPATA17Q96L03 361 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 IL21Q9HBE4 155 aa14.39□□□□□ -0.11
NEK3-210ENST00000620675 SEPT11Q9NVA2 429 aaKnown RBP14.39□□□□□ -0.11
NEK3-210ENST00000620675 NCK2O43639 380 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 MOSPD3O75425 235 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 RHOP08100 348 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 LCP1P13796 627 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 ADIGQ0VDE8 80 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 PDCLQ13371 301 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 STILQ15468 1287 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 TDRD12Q587J7 1177 aaKnown RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 STXBP5Q5T5C0 1151 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 NUP93Q8N1F7 819 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 CMASQ8NFW8 434 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 ITFG1Q8TB96 612 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 SYN2Q92777 582 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 PIWIL1Q96J94 861 aaKnown RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 ZNF512Q96ME7 567 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 DNAI2Q9GZS0 605 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 PDCL3Q9H2J4 239 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 ADAM7Q9H2U9 754 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 ST7Q9NRC1 585 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 CD207Q9UJ71 328 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 E5RJQ4 531 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 CYP1A1P04798 512 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 USP17L7P0C7H9 530 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 SETSIPP0DME0 302 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 HOXB8P17481 243 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 KIF11P52732 1056 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 RAB41Q5JT25 222 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 BHLHA9Q7RTU4 235 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 PHLDB2Q86SQ0 1253 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 ST13P5Q8NFI4 369 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 ING5Q8WYH8 240 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 ULBP1Q9BZM6 244 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 LHX5Q9H2C1 402 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 PIDD1Q9HB75 910 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 CHORDC1Q9UHD1 332 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 DPP7Q9UHL4 492 aa14.38□□□□□ -0.11
NEK3-210ENST00000620675 USP15Q9Y4E8 981 aaPredicted RBP14.38□□□□□ -0.11
NEK3-210ENST00000620675 HELZP42694 1942 aaKnown RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 TMCO5BA8MYB1 307 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 XYLBO75191 536 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 ERBB2P04626 1255 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 SERPING1P05155 500 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 SRGAP2BP0DMP2 458 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 MYL4P12829 197 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 UNGP13051 313 aaPredicted RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 SP100P23497 879 aaPredicted RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 CDH5P33151 784 aaPredicted RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 EIF4A3P38919 411 aaKnown RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 TKTL1P51854 596 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 CYP4F8P98187 520 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 TAF10Q12962 218 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 VEPH1Q14D04 833 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 CYP4A22Q5TCH4 519 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 CNGA4Q8IV77 575 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 SLC4A5Q9BY07 1137 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 POMKQ9H5K3 350 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 OSER1Q9NX31 292 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 IL37Q9NZH6 218 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 A0A087X0T9 212 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 A0A1W2PRU2 124 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 TPM1P09493 284 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 FAM228BP0C875 321 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 CSH1P0DML2 217 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 CSH2P0DML3 217 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 PTPN2P17706 415 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 GABRR2P28476 465 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 MEA1Q16626 185 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 CLEC16AQ2KHT3 1053 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 PABPC1LQ4VXU2 614 aaKnown RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 HFE2Q6ZVN8 426 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 ZNF677Q86XU0 584 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 SCUBE3Q8IX30 993 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 SHKBP1Q8TBC3 707 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 TTLL2Q9BWV7 592 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 MIS12Q9H081 205 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 NUCKS1Q9H1E3 243 aaKnown RBP14.37□□□□□ -0.11
NEK3-210ENST00000620675 NMUR1Q9HB89 426 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 GMIPQ9P107 970 aa14.37□□□□□ -0.11
NEK3-210ENST00000620675 ADAMTS1Q9UHI8 967 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms