RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 CNTNAP2Q9UHC6 1331 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 A0A0B4J269 797 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 ARHGAP42A6NI28 874 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 MCF2LO15068 1137 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 LYPLA1O75608 230 aaPredicted RBP16.75■□□□□ 0.27
DKC1-213ENST00000620277 ERBB2P04626 1255 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 CALB1P05937 261 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 ATXN3P54252 364 aaPredicted RBP16.75■□□□□ 0.27
DKC1-213ENST00000620277 EPHB1P54762 984 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 TGFB2P61812 414 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 ZNF200P98182 395 aaPredicted RBP16.75■□□□□ 0.27
DKC1-213ENST00000620277 DPYSL3Q14195 570 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 RASA2Q15283 850 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 TSNAXIP1Q2TAA8 658 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 EEF1DP3Q658K8 133 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
DKC1-213ENST00000620277 NSL1Q96IY1 281 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 LOC100653049A0A140TA62 436 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 ZMPSTE24O75844 475 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 KRT34O76011 436 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 SUPT20HL2P0C7V6 817 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 ABCG1P45844 678 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 SUPT20HL1Q3ZLR7 823 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 EFHC2Q5JST6 749 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 TRMT10BQ6PF06 316 aaKnown RBP16.75■□□□□ 0.27
DKC1-213ENST00000620277 BTBD10Q9BSF8 475 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 APOL6Q9BWW8 343 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 ACTL7BQ9Y614 415 aa16.75■□□□□ 0.27
DKC1-213ENST00000620277 PMM2O15305 246 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 RNF8O76064 485 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 OATP04181 439 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 NEK3P51956 506 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 ATXN1P54253 815 aaKnown RBP16.74■□□□□ 0.27
DKC1-213ENST00000620277 AMHR2Q16671 573 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 CES3Q6UWW8 571 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 NIPA1Q7RTP0 329 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 TREML1Q86YW5 311 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 CCNJLQ8IV13 435 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 BANPQ8N9N5 519 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 SRPK1Q96SB4 655 aaKnown RBP16.74■□□□□ 0.27
DKC1-213ENST00000620277 EBF4Q9BQW3 602 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 AFG3L2Q9Y4W6 797 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 CCDC78A2IDD5 438 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 CCDC22O60826 627 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 ZC3H11AO75152 810 aaKnown RBP eCLIP16.74■□□□□ 0.276e-12■■□□□ 11.4
DKC1-213ENST00000620277 AP1G2O75843 785 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 ABHD2P08910 425 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 TBXAS1P24557 533 aaPredicted RBP16.74■□□□□ 0.27
DKC1-213ENST00000620277 AQP5P55064 265 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 HADHQ16836 314 aaKnown RBP16.74■□□□□ 0.27
DKC1-213ENST00000620277 TRIM72Q6ZMU5 477 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 RIBC1Q8N443 379 aaPredicted RBP16.74■□□□□ 0.27
DKC1-213ENST00000620277 NAT8LQ8N9F0 302 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 SLC35B2Q8TB61 432 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 DEFB129Q9H1M3 183 aa16.74■□□□□ 0.27
DKC1-213ENST00000620277 C2CD2LO14523 706 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 ZWINTO95229 277 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 GNAT1P11488 350 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 DPEP1P16444 411 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 RBL1P28749 1068 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 SERPINB4P48594 390 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 PIGHQ14442 188 aaPredicted RBP16.73■□□□□ 0.27
DKC1-213ENST00000620277 KRT81Q14533 505 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 DUOXA2Q1HG44 320 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 CTC1Q2NKJ3 1217 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 TEX2Q8IWB9 1127 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 MPP5Q8N3R9 675 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 PEBP4Q96S96 227 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 NIF3L1Q9GZT8 377 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 PORCNQ9H237 461 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 ACSS3Q9H6R3 686 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 BATF3Q9NR55 127 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 FAM49BQ9NUQ9 324 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 SHOC2Q9UQ13 582 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 ASS1P00966 412 aaKnown RBP16.73■□□□□ 0.27
DKC1-213ENST00000620277 CLCN3P51790 818 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 GTF2A2P52657 109 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 SNRPFP62306 86 aaKnown RBP16.73■□□□□ 0.27
DKC1-213ENST00000620277 BST1Q10588 318 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 PPP2R5DQ14738 602 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 SLC45A4Q5BKX6 768 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 CES4AQ5XG92 561 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 STYK1Q6J9G0 422 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 ADPGKQ9BRR6 497 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 TIPINQ9BVW5 301 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 C20orf27Q9GZN8 174 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 KCNK13Q9HB14 408 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 USP18Q9UMW8 372 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 C10orf71Q711Q0 1435 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 STK10O94804 968 aaKnown RBP16.73■□□□□ 0.27
DKC1-213ENST00000620277 ITGB3P05106 788 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 ITGAVP06756 1048 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 PARP6Q2NL67 630 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 ADGRD1Q6QNK2 874 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 GMLQ99445 158 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 PDLIM7Q9NR12 457 aa16.73■□□□□ 0.27
DKC1-213ENST00000620277 ZC3H7BQ9UGR2 993 aaKnown RBP16.73■□□□□ 0.27
DKC1-213ENST00000620277 NRXN2Q9P2S2 1712 aa16.72■□□□□ 0.27
DKC1-213ENST00000620277 ATP5HO75947 161 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms