RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 CYLC2Q14093 348 aaPredicted RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SH3GL3Q99963 347 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 ARHGEF3Q9NR81 526 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 KPNA6O60684 536 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 PCNAP12004 261 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 YWHAQP27348 245 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 HNRNPH2P55795 449 aaKnown RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SHC4Q6S5L8 630 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 ELOA2Q8IYF1 753 aaPredicted RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CARNMT1Q8N4J0 409 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 ZNF614Q8N883 585 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 MKNK1Q9BUB5 465 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 ZBTB39O15060 712 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CST8O60676 142 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 TCF7P36402 384 aaPredicted RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 HIRAP54198 1017 aaPredicted RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 DBR1Q9UK59 544 aaKnown RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SOX13Q9UN79 622 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 JCADQ9P266 1359 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 A0A1W2PQJ5 194 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 TEX33O43247 280 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 BCAT1P54687 386 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 BOLA3Q53S33 107 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 EPHA10Q5JZY3 1008 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CCT7Q99832 543 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 KANSL1LA0AUZ9 987 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SNAP23O00161 211 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 F9P00740 461 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SUPT20HL2P0C7V6 817 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 ITGA9Q13797 1035 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 PDK2Q15119 407 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 TRPM8Q7Z2W7 1104 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 FAM151AQ8WW52 585 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SPIRE2Q8WWL2 714 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CENPTQ96BT3 561 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 RPRD1AQ96P16 312 aaPredicted RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 MAP3K14Q99558 947 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 NYAP2Q9P242 653 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 UBQLN1Q9UMX0 589 aaKnown RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 RAD54BQ9Y620 910 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 ZC3H11AO75152 810 aaKnown RBP eCLIP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 LHX1P48742 406 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CTCFP49711 727 aaPredicted RBP11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 MMRN1Q13201 1228 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 RASGRP2Q7LDG7 609 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SLFN11Q7Z7L1 901 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CCNJLQ8IV13 435 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CCDC103Q8IW40 242 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 MICU2Q8IYU8 434 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 CYP4Z2PQ8N1L4 340 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 PHF20Q9BVI0 1012 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 C10orf88Q9H8K7 445 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 SENP2Q9HC62 589 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 KIAA1257Q9ULG3 409 aa11.55□□□□□ -0.56
CCDC144B-208ENST00000618081 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 GRK4P32298 578 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 PWP1Q13610 501 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 EZH2Q15910 746 aaKnown RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 ZNF484Q5JVG2 852 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 NAT9Q9BTE0 207 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 DRG1Q9Y295 367 aaKnown RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 DAGLAQ9Y4D2 1042 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 V9GYQ6 96 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 E2F8A0AVK6 867 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 NFICP08651 508 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 MAGI3Q5TCQ9 1506 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 MROH9Q5TGP6 573 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 CCDC81Q6ZN84 652 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 ZNF185O15231 689 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 KCNA3P22001 575 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 STIP1P31948 543 aaKnown RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 CUL2Q13617 745 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 PGS1Q32NB8 556 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 TTC33Q6PID6 262 aaPredicted RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 C4orf33Q8N1A6 199 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 E2F7Q96AV8 911 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 LRRC1Q9BTT6 524 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 TLR8Q9NR97 1041 aaKnown RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 RGS18Q9NS28 235 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 LZTS1Q9Y250 596 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 TRIM13O60858 407 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 THP07101 528 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 MMP14P50281 582 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 SIRT2Q8IXJ6 389 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 ADGRF2Q8IZF7 708 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 AHCYL2Q96HN2 611 aaKnown RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 PNKPQ96T60 521 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 SH2D3AQ9BRG2 576 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 AHSPQ9NZD4 102 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 FBXO2Q9UK22 296 aaPredicted RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 BCORL1Q5H9F3 1711 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 RPN2P04844 631 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 AMHR2Q16671 573 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 SYN2Q92777 582 aaPredicted RBP11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 CNPY3Q9BT09 278 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 KCNH7Q9NS40 1196 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 CYP39A1Q9NYL5 469 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 TRPM5Q9NZQ8 1165 aa11.54□□□□□ -0.56
CCDC144B-208ENST00000618081 RPS6KL1Q9Y6S9 549 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms