RNA–Protein interactions for RNA: ENST00000614825.4

DDB2-208, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 3

Gene DDB2, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-208ENST00000614825 EGFP01133 1207 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 CD58P19256 250 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 ADORA2BP29275 332 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 GJA4P35212 333 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 ID4P47928 161 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 PXNP49023 591 aaPredicted RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 GALK1P51570 392 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 NOP14P78316 857 aaKnown RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 CLDN10P78369 228 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 USP4Q13107 963 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 NR1H3Q13133 447 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 SRSF5Q13243 272 aaKnown RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 CCINQ13939 588 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 FSTL4Q6MZW2 842 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 INTS8Q75QN2 995 aaKnown RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 GUF1Q8N442 669 aaKnown RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 CCDC150Q8NCX0 1101 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 SCAMP5Q8TAC9 235 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 SLC2A14Q8TDB8 520 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 ERCC4Q92889 916 aaPredicted RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 EXOC4Q96A65 974 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 SMARCD1Q96GM5 515 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 NACA2Q9H009 215 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 RNF38Q9H0F5 515 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 VRTNQ9H8Y1 702 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 DMAP1Q9NPF5 467 aaPredicted RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 POLR3BQ9NW08 1133 aaPredicted RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 CFAP97Q9P2B7 532 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 GMEB2Q9UKD1 530 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 ARHGAP26Q9UNA1 814 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 DENND4CQ5VZ89 1909 aa12.32□□□□□ -0.44
DDB2-208ENST00000614825 EP300Q09472 2414 aaPredicted RBP12.32□□□□□ -0.44
DDB2-208ENST00000614825 LILRB5O75023 590 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 RNF40O75150 1001 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 RTN3O95197 1032 aaPredicted RBP12.31□□□□□ -0.44
DDB2-208ENST00000614825 ASS1P00966 412 aaKnown RBP12.31□□□□□ -0.44
DDB2-208ENST00000614825 TDGF1P13385 188 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 PPP3CCP48454 512 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 MAP3K7CLP57077 242 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 NUCB2P80303 420 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 PPP3CAQ08209 521 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 SIM2Q14190 667 aaPredicted RBP12.31□□□□□ -0.44
DDB2-208ENST00000614825 EML3Q32P44 896 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 TMEM196Q5HYL7 178 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 C1orf220Q5T0J3 134 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 TCERG1LQ5VWI1 586 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 PKN3Q6P5Z2 889 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 CEP68Q76N32 757 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 FILIP1Q7Z7B0 1213 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 SYNPOQ8N3V7 929 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 C12orf29Q8N999 325 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 TAS1R2Q8TE23 839 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 TAF4BQ92750 862 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 CEP295NLQ96MC4 621 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 TTLL2Q9BWV7 592 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 EPC1Q9H2F5 836 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 FBRSL1Q9HCM7 1045 aaKnown RBP12.31□□□□□ -0.44
DDB2-208ENST00000614825 RMND1Q9NWS8 449 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 USP18Q9UMW8 372 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 SLC8A2Q9UPR5 921 aa12.31□□□□□ -0.44
DDB2-208ENST00000614825 TRDMT1O14717 391 aaKnown RBP12.3□□□□□ -0.44
DDB2-208ENST00000614825 CETN3O15182 167 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 ATG13O75143 517 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 SMC2O95347 1197 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 NFATC1O95644 943 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 IRF1P10914 325 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 EPB41P11171 864 aaKnown RBP12.3□□□□□ -0.44
DDB2-208ENST00000614825 ASPAP45381 313 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 SLC5A3P53794 718 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 SEC13P55735 322 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 ZXDBP98169 803 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 ZNF394Q53GI3 561 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 DCAF17Q5H9S7 520 aaPredicted RBP12.3□□□□□ -0.44
DDB2-208ENST00000614825 HECTD3Q5T447 861 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 ISM2Q6H9L7 571 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 PAQR9Q6ZVX9 377 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.3□□□□□ -0.44
DDB2-208ENST00000614825 FUKQ8N0W3 1084 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 FMR1NBQ8N0W7 255 aaPredicted RBP12.3□□□□□ -0.44
DDB2-208ENST00000614825 PDZD8Q8NEN9 1154 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 NELL1Q92832 810 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 CD101Q93033 1021 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 SMARCE1Q969G3 411 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 TSG101Q99816 390 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 APOBEC3GQ9HC16 384 aaKnown RBP12.3□□□□□ -0.44
DDB2-208ENST00000614825 GMIPQ9P107 970 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 FANCMQ8IYD8 2048 aa12.3□□□□□ -0.44
DDB2-208ENST00000614825 PTPRDP23468 1912 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 K7ESF4 209 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 MAPK13O15264 365 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 HRO43593 1189 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 BEST1O76090 585 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 OAS1P00973 400 aaKnown RBP12.29□□□□□ -0.44
DDB2-208ENST00000614825 FAM200BP0CF97 657 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 DRD1P21728 446 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 PRCPP42785 496 aa12.29□□□□□ -0.44
DDB2-208ENST00000614825 SLC7A9P82251 487 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms