RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 MRPL45Q9BRJ2 306 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 NXF1Q9UBU9 619 aaKnown RBP12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 SERTAD1Q9UHV2 236 aa12.93□□□□□ -0.34
PDLIM2-218ENST00000614502 C2orf78A6NCI8 922 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 F8VP50 259 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 CALUO43852 315 aaPredicted RBP12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 RPN1P04843 607 aaKnown RBP12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 CASP1P29466 404 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 MYL6P60660 151 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 CLDN10P78369 228 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 SLC7A9P82251 487 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 CSRP2Q16527 193 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 CCDC142Q17RM4 750 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 SGSM1Q2NKQ1 1148 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 ZNF699Q32M78 642 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 KMT5BQ4FZB7 885 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 PKN3Q6P5Z2 889 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 NUP93Q8N1F7 819 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 TTC16Q8NEE8 873 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 GAB3Q8WWW8 586 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 ZNF516Q92618 1163 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 TAF4BQ92750 862 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 PAGE5Q96GU1 130 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 CCDC34Q96HJ3 373 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 SLC22A12Q96S37 553 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 SEMA4GQ9NTN9 838 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 DMAC2Q9NW81 257 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 COMMD8Q9NX08 183 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 USP24Q9UPU5 2620 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 FRMD4BQ9Y2L6 1034 aa12.92□□□□□ -0.34
PDLIM2-218ENST00000614502 LAMA1P25391 3075 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 FAM237AA0A1B0GTK4 181 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 ZNF840PA6NDX5 716 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 OTOL1A6NHN0 477 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 IKBKBO14920 756 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 MAPK13O15264 365 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 ACTN4O43707 911 aaKnown RBP12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 KLRC4O43908 158 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 RNF40O75150 1001 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 EGFP01133 1207 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 CCDC192P0DO97 292 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 YWHAQP27348 245 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 STK4Q13043 487 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 NCOA4Q13772 614 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 PRR23CQ6ZRP0 262 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 SYT13Q7L8C5 426 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 CACNA2D4Q7Z3S7 1137 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 FAM160A2Q8N612 972 aaPredicted RBP12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 NETO1Q8TDF5 533 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 MED10Q9BTT4 135 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 IMPG2Q9BZV3 1241 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 XYLT2Q9H1B5 865 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 GDPD2Q9HCC8 539 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 TBC1D14Q9P2M4 693 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 HPSEQ9Y251 543 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 WNT6Q9Y6F9 365 aa12.91□□□□□ -0.34
PDLIM2-218ENST00000614502 A0A1B0GVL5 298 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 A0A1W2PQ27 194 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 A0A1W2PQ64 194 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 A0A1W2PQD8 194 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 LRRIQ3A6PVS8 624 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 LEFTY2O00292 366 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 SLC30A4O14863 429 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 RPP40O75818 363 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 OLFM2O95897 454 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 ABL1P00519 1130 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 C4BPAP04003 597 aaKnown RBP12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 ADRB1P08588 477 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 PFKFB1P16118 471 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 SYKP43405 635 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 PXNP49023 591 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 TAF10Q12962 218 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 CCDC6Q16204 474 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 PREPLQ4J6C6 727 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 PPM1JQ5JR12 505 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 UNC93AQ86WB7 457 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 GRAMD1CQ8IYS0 662 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 KIAA0895Q8NCT3 520 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 RIN3Q8TB24 985 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 OTUB2Q96DC9 234 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 CHFRQ96EP1 664 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 SMARCD1Q96GM5 515 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 B3GNT5Q9BYG0 378 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 ZNF518BQ9C0D4 1074 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 KCTD10Q9H3F6 313 aa12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 DMAP1Q9NPF5 467 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 POLR3BQ9NW08 1133 aaPredicted RBP12.9□□□□□ -0.34
PDLIM2-218ENST00000614502 CFAP47Q6ZTR5 3102 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 AXIN1O15169 862 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 APBB3O95704 486 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 OAS1P00973 400 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 NR3C1P04150 777 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 MBL2P11226 248 aaPredicted RBP12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 EIF2DP41214 584 aaKnown RBP12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 TUBP50607 506 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 USP46P62068 366 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 ENPEPQ07075 957 aa12.89□□□□□ -0.35
PDLIM2-218ENST00000614502 NFIL3Q16649 462 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms