RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 USP15Q9Y4E8 981 aaPredicted RBP10.45□□□□□ -0.74
GGA3-221ENST00000614198 PCDHB2Q9Y5E7 798 aa10.45□□□□□ -0.74
GGA3-221ENST00000614198 MAP3K13O43283 966 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 PDGFRBP09619 1106 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 GBP1P32455 592 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 TUBP50607 506 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 LMNB2Q03252 620 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 RNF180Q86T96 592 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 GSTCDQ8NEC7 633 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 DIS3LQ8TF46 1054 aaKnown RBP10.44□□□□□ -0.74
GGA3-221ENST00000614198 C11orf70Q9BRQ4 267 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 TRIM51Q9BSJ1 452 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 TRIM4Q9C037 500 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 RNF208Q9H0X6 261 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 INPP5FQ9Y2H2 1132 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 PDLIM1O00151 329 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 PTGESO14684 152 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 PMM2O15305 246 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 PDHA1P08559 390 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 CD19P15391 556 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 LMO2P25791 158 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 HOXD10P28358 340 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 LPIN1Q14693 890 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 TCTN1Q2MV58 587 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 ATL2Q8NHH9 583 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 UBA3Q8TBC4 463 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 ZNF606Q8WXB4 792 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 DTNBP1Q96EV8 351 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 SNX27Q96L92 541 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 PRMT1Q99873 361 aaKnown RBP10.44□□□□□ -0.74
GGA3-221ENST00000614198 LBHD1Q9BQE6 289 aaPredicted RBP10.44□□□□□ -0.74
GGA3-221ENST00000614198 ELOVL4Q9GZR5 314 aa10.44□□□□□ -0.74
GGA3-221ENST00000614198 CCDC188H7C350 402 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 PQBP1O60828 265 aaKnown RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 NUDT17P0C025 328 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 IMPDH2P12268 514 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 ITGA4P13612 1032 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 RRM1P23921 792 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 GRM5P41594 1212 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 CDR2Q01850 454 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 TMCO2Q7Z6W1 182 aaPredicted RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 WDTC1Q8N5D0 677 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 IMPG2Q9BZV3 1241 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 SLITRK6Q9H5Y7 841 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 STARD7Q9NQZ5 370 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 FAM114A2Q9NRY5 505 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 FAM49BQ9NUQ9 324 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 CTNNAL1Q9UBT7 734 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 BZW2Q9Y6E2 419 aaKnown RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 CASTOR2A6NHX0 329 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 PGRMC1O00264 195 aaKnown RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 PYGBP11216 843 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 ABCD1P33897 745 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 MGAT3Q09327 533 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 ZNF211Q13398 564 aaPredicted RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 DYNC1I2Q13409 638 aaKnown RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 LRRC23Q53EV4 343 aaPredicted RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 MFSD4BQ5TF39 518 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 HHATQ5VTY9 493 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 DENND2CQ68D51 928 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 RTN4RL1Q86UN2 441 aaPredicted RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 C3orf58Q8NDZ4 430 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 TPCN2Q8NHX9 752 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 SCLYQ96I15 445 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 GLT1D1Q96MS3 346 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 NIF3L1Q9GZT8 377 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 KIAA0391O15091 583 aaKnown RBP10.43□□□□□ -0.74
GGA3-221ENST00000614198 B4GALT3O60512 393 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 SUN1O94901 812 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 SHBGP04278 402 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 CKBP12277 381 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 CALB2P22676 271 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 SCNN1GP51170 649 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 MESDQ14696 234 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 DENND1BQ6P3S1 775 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 ALKAL1Q6UXT8 129 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 ARL10Q8N8L6 244 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 FBF1Q8TES7 1133 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 PPP1R12CQ9BZL4 782 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.43□□□□□ -0.74
GGA3-221ENST00000614198 RNPEPL1Q9HAU8 725 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 CTTNBP2NLQ9P2B4 639 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 TRPV2Q9Y5S1 764 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 VCANP13611 3396 aa10.43□□□□□ -0.74
GGA3-221ENST00000614198 A0A1B0GVG6 124 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 FGFR1P11362 822 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 TCF4P15884 667 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 CYP3A5P20815 502 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 ACAT1P24752 427 aaKnown RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 SKIV2L2P42285 1042 aaKnown RBP10.42□□□□□ -0.74
GGA3-221ENST00000614198 MAGEA8P43361 318 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 KLC1Q07866 573 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 ZNF667Q5HYK9 610 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 AGMOQ6ZNB7 445 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 VPS36Q86VN1 386 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 KRT35Q92764 455 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 ZNF653Q96CK0 615 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 FMO2Q99518 471 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 ADAM2Q99965 735 aa10.42□□□□□ -0.74
GGA3-221ENST00000614198 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms