RNA–Protein interactions for RNA: ENST00000614035.4

TNFAIP3-207, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-207ENST00000614035 LMNB2Q03252 620 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 TAF10Q12962 218 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 SRSF5Q13243 272 aaKnown RBP18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 LPAL2Q16609 132 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 SGSM1Q2NKQ1 1148 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 NAIF1Q69YI7 327 aaPredicted RBP18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 NUP93Q8N1F7 819 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 TAF4BQ92750 862 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 SCAND2PQ9GZW5 306 aaPredicted RBP18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 RNF38Q9H0F5 515 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 LINC00597Q9H2U6 94 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 PARD6AQ9NPB6 346 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 FRMD4BQ9Y2L6 1034 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 ATP6V1DQ9Y5K8 247 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 ATP8B3O60423 1300 aa18.76■□□□□ 0.59
TNFAIP3-207ENST00000614035 LEFTY2O00292 366 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 MAPK13O15264 365 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 CALUO43852 315 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 LRP3O75074 770 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 RTN3O95197 1032 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 KIF20AO95235 890 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 NFATC1O95644 943 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 PRR29P0C7W0 189 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 P4HA1P13674 534 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 HOXC13P31276 330 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 DPYDQ12882 1025 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 NR1H3Q13133 447 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 NFIL3Q16649 462 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 RSPO4Q2I0M5 234 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 C1orf220Q5T0J3 134 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 CEP135Q66GS9 1140 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 SCARA5Q6ZMJ2 495 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 PAQR9Q6ZVX9 377 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 SV2AQ7L0J3 742 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 FAM35AQ86V20 835 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 PDZD8Q8NEN9 1154 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 OVCA2Q8WZ82 227 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 EZH1Q92800 747 aaPredicted RBP18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 CD101Q93033 1021 aa18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 CCDC47Q96A33 483 aaKnown RBP18.75■□□□□ 0.59
TNFAIP3-207ENST00000614035 PRR5-ARHGAP8B1AHC4 643 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 ASS1P00966 412 aaKnown RBP18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 SDHBP21912 280 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 YWHAQP27348 245 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 ARHGAP8P85298 464 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 DGLUCYQ7Z3D6 616 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 ELMO3Q96BJ8 720 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 SMARCD1Q96GM5 515 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 KCNK16Q96T55 309 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 DMAP1Q9NPF5 467 aaPredicted RBP18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 IL37Q9NZH6 218 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 USP18Q9UMW8 372 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 CPQQ9Y646 472 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 ATG2BQ96BY7 2078 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 TNFRSF10BO14763 440 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 CLSTN1O94985 981 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 ENPEPQ07075 957 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 SNX30Q5VWJ9 437 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 FUKQ8N0W3 1084 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 CRYBG2Q8N1P7 616 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 CAMKK1Q8N5S9 505 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 SLC8A2Q9UPR5 921 aa18.74■□□□□ 0.59
TNFAIP3-207ENST00000614035 KIAA1549LQ6ZVL6 1849 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 MYO16Q9Y6X6 1858 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 FAM92AA1XBS5 289 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 AKAP3O75969 853 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 ABL1P00519 1130 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 NR2F2P24468 414 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 ASPAP45381 313 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 VAMP7P51809 220 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 SLC5A3P53794 718 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 SPEM2Q0P670 501 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 GAB4Q2WGN9 574 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 INTS8Q75QN2 995 aaKnown RBP18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 SYT13Q7L8C5 426 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 ACOT1Q86TX2 421 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 UNC93AQ86WB7 457 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 DDX42Q86XP3 938 aaKnown RBP eCLIP18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 GUF1Q8N442 669 aaKnown RBP18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 FBXO32Q969P5 355 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 MED10Q9BTT4 135 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 GOLPH3LQ9H4A5 285 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 COMMD8Q9NX08 183 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 SMPD4Q9NXE4 827 aa18.73■□□□□ 0.59
TNFAIP3-207ENST00000614035 SLC9A3R1O14745 358 aaPredicted RBP18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 HLA-DRAP01903 254 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 OPRD1P41143 372 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 PIK3CAP42336 1068 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 PXNP49023 591 aaPredicted RBP18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 TUBP50607 506 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 NDST1P52848 882 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 IFRD2Q12894 506 aaPredicted RBP18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 CEP68Q76N32 757 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 FILIP1Q7Z7B0 1213 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 ADGRG2Q8IZP9 1017 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 FAM160A2Q8N612 972 aaPredicted RBP18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 RPLP0P6Q8NHW5 317 aa18.72■□□□□ 0.59
TNFAIP3-207ENST00000614035 CCDC26Q8TAB7 109 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms