RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 HDCP19113 662 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 TMEM196Q5HYL7 178 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 HEATR6Q6AI08 1181 aaKnown RBP23.14■■□□□ 1.3
CBWD1-223ENST00000613988 PRR23BQ6ZRT6 265 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 LONP2Q86WA8 852 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 EHD2Q9NZN4 543 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 GCNT4Q9P109 453 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 RWDD2AQ9UIY3 292 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 NME7Q9Y5B8 376 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 GREB1Q4ZG55 1949 aa23.14■■□□□ 1.3
CBWD1-223ENST00000613988 ANAPC1Q9H1A4 1944 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 C2orf78A6NCI8 922 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 PSMA7O14818 248 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 STAU1O95793 577 aaKnown RBP23.14■■□□□ 1.29
CBWD1-223ENST00000613988 PTPN1P18031 435 aaKnown RBP23.14■■□□□ 1.29
CBWD1-223ENST00000613988 ATICP31939 592 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 PRCPP42785 496 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 CASP4P49662 377 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 STK4Q13043 487 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 PAK1Q13153 545 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 SIM2Q14190 667 aaPredicted RBP23.14■■□□□ 1.29
CBWD1-223ENST00000613988 PUM1Q14671 1186 aaKnown RBP eCLIP23.14■■□□□ 1.29
CBWD1-223ENST00000613988 ZNF77Q15935 545 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 FSTL4Q6MZW2 842 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 SARM1Q6SZW1 724 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 SMYD4Q8IYR2 804 aaPredicted RBP23.14■■□□□ 1.29
CBWD1-223ENST00000613988 CPA6Q8N4T0 437 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 OSCP1Q8WVF1 389 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 TRPM5Q9NZQ8 1165 aa23.14■■□□□ 1.29
CBWD1-223ENST00000613988 A8MXQ7 604 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 HRO43593 1189 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 CLSTN1O94985 981 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 CNR2P34972 360 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 IFNAR2P48551 515 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 PDE6CP51160 858 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 GALK1P51570 392 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 USP46P62068 366 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 CCDC173Q0VFZ6 552 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 BIRC3Q13489 604 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 EXOC4Q96A65 974 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 CHFRQ96EP1 664 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 C8orf48Q96LL4 319 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 XYLT2Q9H1B5 865 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 DPEP3Q9H4B8 488 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 ECT2Q9H8V3 914 aa23.13■■□□□ 1.29
CBWD1-223ENST00000613988 CACNA1AO00555 2505 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 PTPRDP23468 1912 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 F8VP50 259 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 ATG13O75143 517 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 KIF20AO95235 890 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 GJA4P35212 333 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 AP3M2P53677 418 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 RSPO4Q2I0M5 234 aaPredicted RBP23.12■■□□□ 1.29
CBWD1-223ENST00000613988 LAIR1Q6GTX8 287 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 KLHL10Q6JEL2 608 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 DGLUCYQ7Z3D6 616 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 GUF1Q8N442 669 aaKnown RBP23.12■■□□□ 1.29
CBWD1-223ENST00000613988 KIAA0895Q8NCT3 520 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 PLEKHO2Q8TD55 490 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 SH3RF2Q8TEC5 729 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 PARD3BQ8TEW8 1205 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 ATP2A3Q93084 1043 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 FBRSL1Q9HCM7 1045 aaKnown RBP23.12■■□□□ 1.29
CBWD1-223ENST00000613988 USP18Q9UMW8 372 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 WNT6Q9Y6F9 365 aa23.12■■□□□ 1.29
CBWD1-223ENST00000613988 EGFP01133 1207 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 DRD1P21728 446 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 HOXA6P31267 233 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 NOP14P78316 857 aaKnown RBP23.11■■□□□ 1.29
CBWD1-223ENST00000613988 USP4Q13107 963 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 SRSF5Q13243 272 aaKnown RBP23.11■■□□□ 1.29
CBWD1-223ENST00000613988 TDRD10Q5VZ19 366 aaKnown RBP23.11■■□□□ 1.29
CBWD1-223ENST00000613988 PKN3Q6P5Z2 889 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 FOXR2Q6PJQ5 311 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 B3GALNT2Q8NCR0 500 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 NELFBQ8WX92 580 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 P2RY13Q9BPV8 354 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 TTLL2Q9BWV7 592 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 ELOVL4Q9GZR5 314 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 DMAC2Q9NW81 257 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 DLL3Q9NYJ7 618 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 ARHGAP26Q9UNA1 814 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 CTNND2Q9UQB3 1225 aa23.11■■□□□ 1.29
CBWD1-223ENST00000613988 ATG2BQ96BY7 2078 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 BICDL2A1A5D9 508 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 LRRIQ3A6PVS8 624 aaPredicted RBP23.1■■□□□ 1.29
CBWD1-223ENST00000613988 PFKLP17858 780 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 HOXC13P31276 330 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 PPP3CCP48454 512 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 ZNF699Q32M78 642 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 SLC9A9Q8IVB4 645 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 PDLIM2Q96JY6 352 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 PPP1R9BQ96SB3 815 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 ZNF518BQ9C0D4 1074 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 VRTNQ9H8Y1 702 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 NFE2L3Q9Y4A8 694 aa23.1■■□□□ 1.29
CBWD1-223ENST00000613988 ZNF840PA6NDX5 716 aa23.09■■□□□ 1.29
CBWD1-223ENST00000613988 RNF40O75150 1001 aa23.09■■□□□ 1.29
CBWD1-223ENST00000613988 ABL1P00519 1130 aa23.09■■□□□ 1.29
CBWD1-223ENST00000613988 C4BPAP04003 597 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms