RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 EIF3CLB5ME19 914 aaKnown RBP15.49■□□□□ 0.07
CD48-203ENST00000613788 TNFRSF10BO14763 440 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 TRANK1O15050 2925 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 NDUFA10O95299 355 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 FTLP02792 175 aaPredicted RBP15.49■□□□□ 0.07
CD48-203ENST00000613788 CSH1P0DML2 217 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 CSH2P0DML3 217 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 MMP8P22894 467 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 TKTL1P51854 596 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 RAB41Q5JT25 222 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 SDHAF4Q5VUM1 108 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 SIX6OS1Q8N1H7 587 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 GIPC2Q8TF65 315 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 C18orf8Q96DM3 657 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 ZNF512Q96ME7 567 aaPredicted RBP15.49■□□□□ 0.07
CD48-203ENST00000613788 CPXM1Q96SM3 734 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 EIF3CQ99613 913 aaKnown RBP15.49■□□□□ 0.07
CD48-203ENST00000613788 FBXO44Q9H4M3 255 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 SPTLC3Q9NUV7 552 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 ADAM22Q9P0K1 906 aa15.49■□□□□ 0.07
CD48-203ENST00000613788 SLC38A8A6NNN8 435 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 FBXO21O94952 628 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 LCA5LO95447 670 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 CALB1P05937 261 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 GTF2F1P35269 517 aaKnown RBP eCLIP15.48■□□□□ 0.07
CD48-203ENST00000613788 GABRB2P47870 512 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 SLC5A3P53794 718 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 CCZ1BP86790 482 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 CCZ1P86791 482 aaPredicted RBP15.48■□□□□ 0.07
CD48-203ENST00000613788 C1QBPQ07021 282 aaKnown RBP15.48■□□□□ 0.07
CD48-203ENST00000613788 ADAM15Q13444 863 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 PTPN20Q4JDL3 420 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 RAD9BQ6WBX8 426 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 Q7L0L9 218 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 ZDHHC17Q8IUH5 632 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 GPR152Q8TDT2 470 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 TRIM11Q96F44 468 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 CDX2Q99626 313 aaPredicted RBP15.48■□□□□ 0.07
CD48-203ENST00000613788 TAS2R14Q9NYV8 317 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 STRIP2Q9ULQ0 834 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 E5RJQ4 531 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 XYLBO75191 536 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 LCP1P13796 627 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 YWHAQP27348 245 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 KRT83P78385 493 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 MTF1Q14872 753 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 MMS22LQ6ZRQ5 1243 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 DNAJB7Q7Z6W7 309 aaPredicted RBP15.48■□□□□ 0.07
CD48-203ENST00000613788 MCOLN2Q8IZK6 566 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 SCML4Q8N228 414 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 MYLIPQ8WY64 445 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 PSMG2Q969U7 264 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 SFXN1Q9H9B4 322 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 CNGB3Q9NQW8 809 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 IL37Q9NZH6 218 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 WDR35Q9P2L0 1181 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 NENFQ9UMX5 172 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 USP3Q9Y6I4 520 aa15.48■□□□□ 0.07
CD48-203ENST00000613788 MYO9BQ13459 2157 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 CCDC195A0A1B0GUA6 201 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 CCL16O15467 120 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 SART1O43290 800 aaKnown RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 RFPL2O75678 378 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 ZBED1O96006 694 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 ERBB2P04626 1255 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 POU2F2P09086 479 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 MYBL1P10243 752 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 HOXB8P17481 243 aaPredicted RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 MAGEA1P43355 309 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 ADIGQ0VDE8 80 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 IFRD2Q12894 506 aaPredicted RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 ZNF268Q14587 947 aaPredicted RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 MON1BQ7L1V2 547 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 GPRIN1Q7Z2K8 1008 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 SCUBE3Q8IX30 993 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 MICALL1Q8N3F8 863 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 CMASQ8NFW8 434 aaPredicted RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 VN1R2Q8NFZ6 395 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 SCAMP5Q8TAC9 235 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 TRMT2BQ96GJ1 504 aaKnown RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 MYRFLQ96LU7 910 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 C11orf70Q9BRQ4 267 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 TTLL2Q9BWV7 592 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 PRKD2Q9BZL6 878 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 UXTQ9UBK9 157 aaPredicted RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 MAGED2Q9UNF1 606 aaPredicted RBP15.47■□□□□ 0.07
CD48-203ENST00000613788 PTPRDP23468 1912 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 MYO7AQ13402 2215 aa15.47■□□□□ 0.07
CD48-203ENST00000613788 CDH23Q9H251 3354 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 FAM170AA1A519 330 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 ANKRD62A6NC57 917 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 PIK3R2O00459 728 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 ZNF263O14978 683 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 GABBR2O75899 941 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 H2AFZP0C0S5 128 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 FOSL2P15408 326 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 PTPN2P17706 415 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 GALCP54803 685 aa15.46■□□□□ 0.07
CD48-203ENST00000613788 RBM10P98175 930 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms