RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 LRRC4Q9HBW1 653 aa14□□□□□ -0.17
MDC1-209ENST00000613547 CEP83Q9Y592 693 aa14□□□□□ -0.17
MDC1-209ENST00000613547 SOBPA7XYQ1 873 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 C2CD4DB7Z1M9 353 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 LOC730098B7Z3J9 87 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 GFPT2O94808 682 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 F11P03951 625 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 CYP11B1P15538 503 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 GJA1P17302 382 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 CLCN1P35523 988 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 PLA2G4AP47712 749 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 JAM2P57087 298 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 USP46P62068 366 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 TEAD2Q15562 447 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 GPR158Q5T848 1215 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 SARM1Q6SZW1 724 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 SLC47A2Q86VL8 602 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 ZNF677Q86XU0 584 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 GJD3Q8N144 294 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 SECISBP2LQ93073 1101 aaKnown RBP13.99□□□□□ -0.17
MDC1-209ENST00000613547 MCRS1Q96EZ8 462 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 NOX5Q96PH1 765 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 UHRF1Q96T88 793 aaPredicted RBP13.99□□□□□ -0.17
MDC1-209ENST00000613547 ZSWIM1Q9BR11 485 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 NUCKS1Q9H1E3 243 aaKnown RBP13.99□□□□□ -0.17
MDC1-209ENST00000613547 RBSNQ9H1K0 784 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 ACP6Q9NPH0 428 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 IL37Q9NZH6 218 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 EPS15L1Q9UBC2 864 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 PCDHGC3Q9UN70 934 aa13.99□□□□□ -0.17
MDC1-209ENST00000613547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.99□□□□□ -0.174e-7■□□□□ 10.9
MDC1-209ENST00000613547 COL6A3P12111 3177 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 NCANO14594 1321 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 FAM92AA1XBS5 289 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 HHLA1C9JL84 531 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 ABL1P00519 1130 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 CALCAP01258 141 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 FERP16591 822 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 AVPR1AP37288 418 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 PBX1P40424 430 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 TKTL1P51854 596 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 KIF11P52732 1056 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 SNX16P57768 344 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 CYP4F8P98187 520 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 TAF10Q12962 218 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 PTPN21Q16825 1174 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 PKDCCQ504Y2 493 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 MTSS1LQ765P7 747 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 SIX6OS1Q8N1H7 587 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 ARHGAP18Q8N392 663 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 STK32AQ8WU08 396 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 KCTD13Q8WZ19 329 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 HSFY1Q96LI6 401 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 TRIM5Q9C035 493 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 TASP1Q9H6P5 420 aa13.98□□□□□ -0.17
MDC1-209ENST00000613547 TLR8Q9NR97 1041 aaKnown RBP13.98□□□□□ -0.17
MDC1-209ENST00000613547 EYSQ5T1H1 3165 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 ITIH6Q6UXX5 1313 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 A0A1W2PQJ5 194 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 C19orf67A6NJJ6 358 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 MOSPD3O75425 235 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 PFKLP17858 780 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 GPD2P43304 727 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 ACADSBP45954 432 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 PSEN1P49768 467 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 ARID5AQ03989 594 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 TRIM14Q14142 442 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 RAB41Q5JT25 222 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 SPECC1LQ69YQ0 1117 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 DENND1BQ6P3S1 775 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 GPRIN1Q7Z2K8 1008 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 CCDC186Q7Z3E2 898 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 TMEM150AQ86TG1 271 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 MON1AQ86VX9 555 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 GAS2L3Q86XJ1 694 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 TMEM35BQ8NCS4 154 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 ZSCAN18Q8TBC5 510 aaPredicted RBP13.97□□□□□ -0.17
MDC1-209ENST00000613547 EPS8L1Q8TE68 723 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 SLC35F5Q8WV83 523 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 NXPE3Q969Y0 559 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 E2F7Q96AV8 911 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 LHX5Q9H2C1 402 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 TRPC7Q9HCX4 862 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 ST7Q9NRC1 585 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 IGSF9Q9P2J2 1179 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 SCML2Q9UQR0 700 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 REV3LO60673 3130 aa13.97□□□□□ -0.17
MDC1-209ENST00000613547 TRAV19A0A0A6YYK7 116 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 ZNF840PA6NDX5 716 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 LRRC53A6NM62 1247 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 DPYSL4O14531 572 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 SART1O43290 800 aaKnown RBP13.96□□□□□ -0.17
MDC1-209ENST00000613547 FBXO21O94952 628 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 LSM8O95777 96 aaKnown RBP13.96□□□□□ -0.17
MDC1-209ENST00000613547 ZBED1O96006 694 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 TPM1P09493 284 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 USP17L7P0C7H9 530 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 RGS7P49802 495 aa13.96□□□□□ -0.17
MDC1-209ENST00000613547 ADIGQ0VDE8 80 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms