RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 ZMYND11Q15326 602 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 SMYD1Q8NB12 490 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 OR2L5Q8NG80 312 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 KBTBD7Q8WVZ9 684 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 BDH2Q9BUT1 245 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 CDH18Q13634 790 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 DRAP1Q14919 205 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-206ENST00000613296 TIMM50Q3ZCQ8 353 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 FAM117BQ6P1L5 589 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 PRKD2Q9BZL6 878 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 INTS2Q9H0H0 1204 aaKnown RBP8.65□□□□□ -1.02
ALMS1-206ENST00000613296 CHMP1AQ9HD42 196 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-206ENST00000613296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.65□□□□□ -1.02
ALMS1-206ENST00000613296 PNMA6EA0A0J9YXQ4 647 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 PSMD3O43242 534 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 FGAP02671 866 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 RB1P06400 928 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 R3HDM1Q15032 1099 aaKnown RBP8.65□□□□□ -1.02
ALMS1-206ENST00000613296 RGS21Q2M5E4 152 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 PYDC2Q56P42 97 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 NEU2Q9Y3R4 380 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 RP1L1Q8IWN7 2480 aaPredicted RBP8.65□□□□□ -1.02
ALMS1-206ENST00000613296 RAD17O75943 681 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 A1BGP04217 495 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 NPR2P20594 1047 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 RPS8P62241 208 aaKnown RBP8.65□□□□□ -1.02
ALMS1-206ENST00000613296 MTMR1Q13613 665 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 SPATA18Q8TC71 538 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 DGCR6Q14129 220 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 PACS1Q6VY07 963 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 TPD52L3Q96J77 140 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 SLC4A9Q96Q91 983 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 SLC35C2Q9NQQ7 365 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 UGGT2Q9NYU1 1516 aa8.65□□□□□ -1.02
ALMS1-206ENST00000613296 SASH1O94885 1247 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 HSD3B1P14060 373 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 COASYQ13057 564 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 SNX17Q15036 470 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 FAM83BQ5T0W9 1011 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 ARL6IP4Q66PJ3 421 aaKnown RBP8.65□□□□□ -1.03
ALMS1-206ENST00000613296 ERICH5Q6P6B1 374 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 UTS2BQ765I0 119 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 MXD3Q9BW11 206 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 RLN1P04808 185 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 SNRPAP09012 282 aaKnown RBP8.65□□□□□ -1.03
ALMS1-206ENST00000613296 RAB25P57735 213 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 MROH9Q5TGP6 573 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 TXNDC11Q6PKC3 985 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 MARK2Q7KZI7 788 aaKnown RBP8.65□□□□□ -1.03
ALMS1-206ENST00000613296 SPIRE2Q8WWL2 714 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 PNPLA8Q9NP80 782 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 MARK1Q9P0L2 795 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 AMACRQ9UHK6 382 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 LIN7AO14910 233 aaPredicted RBP8.65□□□□□ -1.03
ALMS1-206ENST00000613296 KRT36O76013 467 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 PABPC1P11940 636 aaKnown RBP8.65□□□□□ -1.03
ALMS1-206ENST00000613296 RXRGP48443 463 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 PDK1Q15118 436 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 FGD3Q5JSP0 725 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 MIIPQ5JXC2 388 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 RAB6BQ9NRW1 208 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 PFDN2Q9UHV9 154 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 IRAK3Q9Y616 596 aa8.65□□□□□ -1.03
ALMS1-206ENST00000613296 SLC1A1P43005 524 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 UNC13DQ70J99 1090 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 S100ZQ8WXG8 99 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 CCDC17Q96LX7 622 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 BTBD9Q96Q07 612 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 CD248Q9HCU0 757 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 ZCCHC17Q9NP64 241 aaKnown RBP8.64□□□□□ -1.03
ALMS1-206ENST00000613296 TMCO1Q9UM00 188 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 USP19O94966 1318 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 A0A0G2JPF8 293 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 HNRNPCL3B7ZW38 293 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 HS6ST1O60243 411 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 ZNF432O94892 652 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 HNRNPCL4P0DMR1 293 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 GALNT3Q14435 633 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 MED8Q96G25 268 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 ZSWIM6Q9HCJ5 1215 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 RBM7Q9Y580 266 aaKnown RBP8.64□□□□□ -1.03
ALMS1-206ENST00000613296 NESP48681 1621 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 PRKAR1AP10644 381 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 BMP3P12645 472 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 CBX5P45973 191 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 NR1D2Q14995 579 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 PRR5LQ6MZQ0 368 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 E2F7Q96AV8 911 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 PIF1Q9H611 641 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-206ENST00000613296 UBA1P22314 1058 aaKnown RBP8.64□□□□□ -1.03
ALMS1-206ENST00000613296 MTTPP55157 894 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 ADARP55265 1226 aaKnown RBP8.64□□□□□ -1.03
ALMS1-206ENST00000613296 TMEM63BQ5T3F8 832 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 ZNF341Q9BYN7 854 aa8.64□□□□□ -1.03
ALMS1-206ENST00000613296 TUBA8Q9NY65 449 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-206ENST00000613296 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
ALMS1-206ENST00000613296 IFT140Q96RY7 1462 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms