RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 GZMAP12544 262 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 MMP8P22894 467 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 RPL34P49207 117 aaKnown RBP12.71□□□□□ -0.37
CLK4-215ENST00000611733 TKTL1P51854 596 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 SLC5A3P53794 718 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 ADIGQ0VDE8 80 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 TAF5Q15542 800 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 RAB41Q5JT25 222 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 MON1BQ7L1V2 547 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 TMEM110Q86TL2 294 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 VPS36Q86VN1 386 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 MCOLN2Q8IZK6 566 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 KCTD13Q8WZ19 329 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 GUCD1Q96NT3 240 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 APOL5Q9BWW9 433 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 LMCD1Q9NZU5 365 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 HSFX1Q9UBD0 423 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 MAGED2Q9UNF1 606 aaPredicted RBP12.71□□□□□ -0.37
CLK4-215ENST00000611733 CEP83Q9Y592 693 aa12.71□□□□□ -0.37
CLK4-215ENST00000611733 SLC38A8A6NNN8 435 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 EIF3CLB5ME19 914 aaKnown RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 NRG2O14511 850 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 TRIM66O15016 1216 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 PAPSS1O43252 624 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 LCA5LO95447 670 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 USP17L7P0C7H9 530 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 POU3F3P20264 500 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 ABCB4P21439 1286 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 ANXA13P27216 316 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 NSFP46459 744 aaKnown RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 ALDH1A3P47895 512 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 GALCP54803 685 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 SLC8A3P57103 927 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 RPL10AP62906 217 aaKnown RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 DLX2Q07687 328 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 PHF13Q86YI8 300 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 DEFB123Q8N688 67 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 STK32AQ8WU08 396 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 EIF3CQ99613 913 aaKnown RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 ULBP1Q9BZM6 244 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 UBXN6Q9BZV1 441 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 HCFC1R1Q9NWW0 138 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 ADAM22Q9P0K1 906 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 CDH22Q9UJ99 828 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 PYCARDQ9ULZ3 195 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 ARHGAP6O43182 974 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 ZMYND10O75800 440 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 ABL1P00519 1130 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 HMGA1P17096 107 aaKnown RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 CYLC1P35663 651 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 CCDC85BQ15834 202 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 PPM1LQ5SGD2 360 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 LIN9Q5TKA1 542 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 DENND5BQ6ZUT9 1274 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 DNAJB7Q7Z6W7 309 aaPredicted RBP12.7□□□□□ -0.38
CLK4-215ENST00000611733 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 NUP93Q8N1F7 819 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 CCDC112Q8NEF3 446 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 C18orf8Q96DM3 657 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 ARHGEF26Q96DR7 871 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 SPATA17Q96L03 361 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 HSFY1Q96LI6 401 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 THAP2Q9H0W7 228 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 PLEKHA4Q9H4M7 779 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 LRRC4Q9HBW1 653 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 MAFFQ9ULX9 164 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 PCDHA13Q9Y5I0 950 aa12.7□□□□□ -0.38
CLK4-215ENST00000611733 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
CLK4-215ENST00000611733 CCDC195A0A1B0GUA6 201 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 RRM1P23921 792 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 MAGEA1P43355 309 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 GABRB2P47870 512 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 ADAM15Q13444 863 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 OR6B2Q6IFH4 312 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 CCDC149Q6ZUS6 474 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 HFE2Q6ZVN8 426 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 FAM183BPQ6ZVS7 135 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 BHLHA9Q7RTU4 235 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 XYLT1Q86Y38 959 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.383e-6■■■□□ 16.4
CLK4-215ENST00000611733 GAS2L1Q99501 681 aaPredicted RBP12.69□□□□□ -0.38
CLK4-215ENST00000611733 ZNF334Q9HCZ1 680 aaPredicted RBP12.69□□□□□ -0.38
CLK4-215ENST00000611733 USP3Q9Y6I4 520 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 GOLGA8SH3BPF8 625 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 GRAP2O75791 330 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 LRG1P02750 347 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 EPHB3P54753 998 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 TMC5Q6UXY8 1006 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 EFHBQ8N7U6 833 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
CLK4-215ENST00000611733 NOX5Q96PH1 765 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 CDCA3Q99618 268 aaPredicted RBP12.69□□□□□ -0.38
CLK4-215ENST00000611733 SYNCQ9H7C4 482 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 PNPLA8Q9NP80 782 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 MTMR10Q9NXD2 777 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 IL37Q9NZH6 218 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 CLEC1BQ9P126 229 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 MYO1AQ9UBC5 1043 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 ADGRG1Q9Y653 693 aa12.69□□□□□ -0.38
CLK4-215ENST00000611733 MYH10P35580 1976 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms