RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 TPM4P67936 248 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 TMEM196Q5HYL7 178 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 HEATR6Q6AI08 1181 aaKnown RBP23.14■■□□□ 1.3
CBWD3-207ENST00000611426 PRR23BQ6ZRT6 265 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 LONP2Q86WA8 852 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 HSD3B7Q9H2F3 369 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 EXOC1Q9NV70 894 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 EHD2Q9NZN4 543 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 GCNT4Q9P109 453 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 NME7Q9Y5B8 376 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 GREB1Q4ZG55 1949 aa23.14■■□□□ 1.3
CBWD3-207ENST00000611426 ANAPC1Q9H1A4 1944 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 C2orf78A6NCI8 922 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 ADCY5O95622 1261 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 STAU1O95793 577 aaKnown RBP23.14■■□□□ 1.29
CBWD3-207ENST00000611426 PTPN1P18031 435 aaKnown RBP23.14■■□□□ 1.29
CBWD3-207ENST00000611426 ATICP31939 592 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 CASP4P49662 377 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 STK4Q13043 487 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 PSMD2Q13200 908 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 SIM2Q14190 667 aaPredicted RBP23.14■■□□□ 1.29
CBWD3-207ENST00000611426 PUM1Q14671 1186 aaKnown RBP eCLIP23.14■■□□□ 1.29
CBWD3-207ENST00000611426 ZNF77Q15935 545 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 FSTL4Q6MZW2 842 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 CPA6Q8N4T0 437 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 OSCP1Q8WVF1 389 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 TRPM5Q9NZQ8 1165 aa23.14■■□□□ 1.29
CBWD3-207ENST00000611426 A8MXQ7 604 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 HRO43593 1189 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 CLSTN1O94985 981 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 CD44P16070 742 aaKnown RBP23.13■■□□□ 1.29
CBWD3-207ENST00000611426 CNR2P34972 360 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 IFNAR2P48551 515 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 PDE6CP51160 858 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 GALK1P51570 392 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 USP46P62068 366 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 BIRC3Q13489 604 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 EXOC4Q96A65 974 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 CHFRQ96EP1 664 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 C8orf48Q96LL4 319 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 MED15Q96RN5 788 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 XYLT2Q9H1B5 865 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 DPEP3Q9H4B8 488 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 ECT2Q9H8V3 914 aa23.13■■□□□ 1.29
CBWD3-207ENST00000611426 CACNA1AO00555 2505 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 PTPRDP23468 1912 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 F8VP50 259 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 ATG13O75143 517 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 GJA4P35212 333 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 AP3M2P53677 418 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 RSPO4Q2I0M5 234 aaPredicted RBP23.12■■□□□ 1.29
CBWD3-207ENST00000611426 LAIR1Q6GTX8 287 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 FOXR2Q6PJQ5 311 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 DGLUCYQ7Z3D6 616 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 KIAA0895Q8NCT3 520 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 PLEKHO2Q8TD55 490 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 SH3RF2Q8TEC5 729 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 PARD3BQ8TEW8 1205 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 ATP2A3Q93084 1043 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 FBRSL1Q9HCM7 1045 aaKnown RBP23.12■■□□□ 1.29
CBWD3-207ENST00000611426 RWDD2AQ9UIY3 292 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 USP18Q9UMW8 372 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 WNT6Q9Y6F9 365 aa23.12■■□□□ 1.29
CBWD3-207ENST00000611426 EGFP01133 1207 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 ZNF18P17022 549 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 DRD1P21728 446 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 CDC25BP30305 580 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 HOXA6P31267 233 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 NOP14P78316 857 aaKnown RBP23.11■■□□□ 1.29
CBWD3-207ENST00000611426 USP4Q13107 963 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 SRSF5Q13243 272 aaKnown RBP23.11■■□□□ 1.29
CBWD3-207ENST00000611426 TDRD10Q5VZ19 366 aaKnown RBP23.11■■□□□ 1.29
CBWD3-207ENST00000611426 PKN3Q6P5Z2 889 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.11■■□□□ 1.29
CBWD3-207ENST00000611426 B3GALNT2Q8NCR0 500 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 MRFAP1L1Q96HT8 127 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 P2RY13Q9BPV8 354 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 TTLL2Q9BWV7 592 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 ELOVL4Q9GZR5 314 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 DMAC2Q9NW81 257 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 DLL3Q9NYJ7 618 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 ARHGAP26Q9UNA1 814 aa23.11■■□□□ 1.29
CBWD3-207ENST00000611426 ATG2BQ96BY7 2078 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 LRRIQ3A6PVS8 624 aaPredicted RBP23.1■■□□□ 1.29
CBWD3-207ENST00000611426 PFKLP17858 780 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 HOXC13P31276 330 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 PPP3CCP48454 512 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 ZNF75DP51815 510 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 ZNF699Q32M78 642 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 HS1BP3Q53T59 392 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 SLC9A9Q8IVB4 645 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 DHTKD1Q96HY7 919 aaPredicted RBP23.1■■□□□ 1.29
CBWD3-207ENST00000611426 ZNF518BQ9C0D4 1074 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 VRTNQ9H8Y1 702 aa23.1■■□□□ 1.29
CBWD3-207ENST00000611426 ZNF840PA6NDX5 716 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 RNF40O75150 1001 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 ABL1P00519 1130 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 C4BPAP04003 597 aaKnown RBP23.09■■□□□ 1.29
CBWD3-207ENST00000611426 RETP07949 1114 aa23.09■■□□□ 1.29
CBWD3-207ENST00000611426 TCF3P15923 654 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms