RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 ZNF667Q5HYK9 610 aa17.03■□□□□ 0.32
SGMS1-209ENST00000609445 RPLP0P6Q8NHW5 317 aa17.03■□□□□ 0.32
SGMS1-209ENST00000609445 HHIPQ96QV1 700 aa17.03■□□□□ 0.32
SGMS1-209ENST00000609445 ELOVL4Q9GZR5 314 aa17.03■□□□□ 0.32
SGMS1-209ENST00000609445 VRTNQ9H8Y1 702 aa17.03■□□□□ 0.32
SGMS1-209ENST00000609445 SMPD4Q9NXE4 827 aa17.03■□□□□ 0.32
SGMS1-209ENST00000609445 ANTXRLA6NF34 631 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 ATG13O75143 517 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 OAS1P00973 400 aaKnown RBP17.02■□□□□ 0.32
SGMS1-209ENST00000609445 NR3C1P04150 777 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 PRR29P0C7W0 189 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 CMA1P23946 247 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 CLDN10P78369 228 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 PSMD2Q13200 908 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 ORC1Q13415 861 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 FAM35AQ86V20 835 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 SLC9A9Q8IVB4 645 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 SPATA32Q96LK8 384 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 KCNK16Q96T55 309 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 MED10Q9BTT4 135 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 SEMA4GQ9NTN9 838 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 EHD2Q9NZN4 543 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 CDV3Q9UKY7 258 aaKnown RBP17.02■□□□□ 0.32
SGMS1-209ENST00000609445 HPSEQ9Y251 543 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 CPQQ9Y646 472 aa17.02■□□□□ 0.32
SGMS1-209ENST00000609445 CNOT1A5YKK6 2376 aaKnown RBP17.01■□□□□ 0.31
SGMS1-209ENST00000609445 DCDC2BA2VCK2 349 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 PDXKO00764 312 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 NFATC1O95644 943 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 OLFM2O95897 454 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 PFKLP17858 780 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 OPRD1P41143 372 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 PDE6CP51160 858 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 AP3M2P53677 418 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 SLC7A9P82251 487 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 NR1H3Q13133 447 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 PAQR9Q6ZVX9 377 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 FILIP1Q7Z7B0 1213 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 ACOT1Q86TX2 421 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 NUP93Q8N1F7 819 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 SCAMP5Q8TAC9 235 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 GAB3Q8WWW8 586 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 FBXO32Q969P5 355 aa17.01■□□□□ 0.31
SGMS1-209ENST00000609445 TPRP12270 2363 aaKnown RBP17■□□□□ 0.31
SGMS1-209ENST00000609445 AXIN1O15169 862 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 LRP3O75074 770 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 RPP40O75818 363 aaKnown RBP17■□□□□ 0.31
SGMS1-209ENST00000609445 RPN1P04843 607 aaKnown RBP17■□□□□ 0.31
SGMS1-209ENST00000609445 CYP17A1P05093 508 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 SDHBP21912 280 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 YWHAQP27348 245 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 PPP3CCP48454 512 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 NDUFA8P51970 172 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 ZACNQ401N2 412 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 FBXO43Q4G163 708 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 C1orf220Q5T0J3 134 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 CEP135Q66GS9 1140 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 SPOPLQ6IQ16 392 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 PRR23CQ6ZRP0 262 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 SV2AQ7L0J3 742 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 KBTBD6Q86V97 674 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 EXOC4Q96A65 974 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 SLITRK1Q96PX8 696 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17■□□□□ 0.318e-7■■■■■ 89.9
SGMS1-209ENST00000609445 CFAP97Q9P2B7 532 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 HMGXB4Q9UGU5 601 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 CHORDC1Q9UHD1 332 aaPredicted RBP17■□□□□ 0.31
SGMS1-209ENST00000609445 USP25Q9UHP3 1055 aa17■□□□□ 0.31
SGMS1-209ENST00000609445 ATP8B3O60423 1300 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 CCDC163A0A0D9SF12 145 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.99■□□□□ 0.31
SGMS1-209ENST00000609445 GDF9O60383 454 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 AP1G2O75843 785 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 RTN3O95197 1032 aaPredicted RBP16.99■□□□□ 0.31
SGMS1-209ENST00000609445 CCDC192P0DO97 292 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 MBL2P11226 248 aaPredicted RBP16.99■□□□□ 0.31
SGMS1-209ENST00000609445 CCDC130P13994 396 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 SYKP43405 635 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 SEC13P55735 322 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 KRT85P78386 507 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 DMC1Q14565 340 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 CCDC6Q16204 474 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 CSRP2Q16527 193 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 FUKQ8N0W3 1084 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 TMC2Q8TDI7 906 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 TMEM174Q8WUU8 243 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 ARRDC1-AS1Q9H2J1 176 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 ABCA7Q8IZY2 2146 aa16.99■□□□□ 0.31
SGMS1-209ENST00000609445 MYO18AQ92614 2054 aaKnown RBP16.98■□□□□ 0.31
SGMS1-209ENST00000609445 K7EQS6 105 aa16.98■□□□□ 0.31
SGMS1-209ENST00000609445 TNFRSF10BO14763 440 aa16.98■□□□□ 0.31
SGMS1-209ENST00000609445 COCHO43405 550 aa16.98■□□□□ 0.31
SGMS1-209ENST00000609445 HLA-DRAP01903 254 aa16.98■□□□□ 0.31
SGMS1-209ENST00000609445 SLC6A11P48066 632 aa16.98■□□□□ 0.31
SGMS1-209ENST00000609445 NDST1P52848 882 aa16.98■□□□□ 0.31
SGMS1-209ENST00000609445 SLC5A3P53794 718 aa16.98■□□□□ 0.31
SGMS1-209ENST00000609445 MESP2Q0VG99 397 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms