RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 PTMAP06454 111 aaKnown RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 UNGP13051 313 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 LCP1P13796 627 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 HOXA9P31269 272 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CDH5P33151 784 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 TKTL1P51854 596 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 KIF11P52732 1056 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 EPHB3P54753 998 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CDK17Q00537 523 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CENPCQ03188 943 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 GFPT1Q06210 699 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 DLX2Q07687 328 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 ADIGQ0VDE8 80 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CCDC173Q0VFZ6 552 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 PLD1Q13393 1074 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 ADAM15Q13444 863 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 COL19A1Q14993 1142 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 VEPH1Q14D04 833 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CLUL1Q15846 466 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 SLC18A3Q16572 532 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CTC1Q2NKJ3 1217 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 ASTE1Q2TB18 679 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 RARS2Q5T160 578 aaKnown RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 CYP4A22Q5TCH4 519 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 ELMSAN1Q6PJG2 1045 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 TMC5Q6UXY8 1006 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CYP26C1Q6V0L0 522 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 RAD9BQ6WBX8 426 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 TRIM72Q6ZMU5 477 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 MMS22LQ6ZRQ5 1243 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 VPS36Q86VN1 386 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CLEC4CQ8WTT0 213 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 HDAC7Q8WUI4 952 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 PPM1EQ8WY54 764 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CASP10Q92851 521 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 ZNF707Q96C28 371 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 PIWIL1Q96J94 861 aaKnown RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 PPP1R13BQ96KQ4 1090 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 SPATA17Q96L03 361 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CCDC42Q96M95 316 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 PPP1R9BQ96SB3 815 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 C11orf70Q9BRQ4 267 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 MIS12Q9H081 205 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 SFXN1Q9H9B4 322 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 ZNF334Q9HCZ1 680 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 PNPLA8Q9NP80 782 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 DZANK1Q9NVP4 752 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 ZDHHC7Q9NXF8 308 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 CLEC1BQ9P126 229 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 DPP7Q9UHL4 492 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 NENFQ9UMX5 172 aa8.1□□□□□ -1.11
MSH6-211ENST00000606499 MAGED2Q9UNF1 606 aaPredicted RBP8.1□□□□□ -1.11
MSH6-211ENST00000606499 ANAPC1Q9H1A4 1944 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 NOTCH4Q99466 2003 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 NRG2O14511 850 aaPredicted RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 ZNF263O14978 683 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 ATMINO43313 823 aaPredicted RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 HNRNPA1P09651 372 aaKnown RBP eCLIP8.09□□□□□ -1.11
MSH6-211ENST00000606499 SRGAP2BP0DMP2 458 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 HMGA1P17096 107 aaKnown RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 MMP8P22894 467 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 LTBRP36941 435 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 NSFP46459 744 aaKnown RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 NTHL1P78549 312 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 CCZ1BP86790 482 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 CCZ1P86791 482 aaPredicted RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 PTP4A2Q12974 167 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 RAB41Q5JT25 222 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 ACAD10Q6JQN1 1059 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 ANKRD54Q6NXT1 300 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 SYCE2Q6PIF2 218 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 TMEM184AQ6ZMB5 413 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 DENND5BQ6ZUT9 1274 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 FAM183BPQ6ZVS7 135 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 MON1BQ7L1V2 547 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 BHLHA9Q7RTU4 235 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 PHLDB2Q86SQ0 1253 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 ERICH1Q86X53 443 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 TMC8Q8IU68 726 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 TMTC1Q8IUR5 882 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 LRRC8AQ8IWT6 810 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 SCUBE3Q8IX30 993 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 HS6ST3Q8IZP7 471 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 NUP93Q8N1F7 819 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 SIX6OS1Q8N1H7 587 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 STK32AQ8WU08 396 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 SMG7Q92540 1137 aaKnown RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 NDRG1Q92597 394 aaKnown RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 PSMG2Q969U7 264 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 PABPC5Q96DU9 382 aaKnown RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 ZNF830Q96NB3 372 aaPredicted RBP8.09□□□□□ -1.11
MSH6-211ENST00000606499 NOX5Q96PH1 765 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 CORO1BQ9BR76 489 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 TTLL2Q9BWV7 592 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 SLC4A5Q9BY07 1137 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 PRKD2Q9BZL6 878 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 ULBP1Q9BZM6 244 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 UBXN6Q9BZV1 441 aa8.09□□□□□ -1.11
MSH6-211ENST00000606499 KCNF1Q9H3M0 494 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms