RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 E2F7Q96AV8 911 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 SHDQ96IW2 340 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 PRRX2Q99811 253 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 ZSWIM1Q9BR11 485 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 OSBPL6Q9BZF3 934 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 RAB20Q9NX57 234 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 GMIPQ9P107 970 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 CHORDC1Q9UHD1 332 aaPredicted RBP11.33□□□□□ -0.6
TUBE1-210ENST00000604967 CTNND2Q9UQB3 1225 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 WNT6Q9Y6F9 365 aa11.33□□□□□ -0.6
TUBE1-210ENST00000604967 ZNF292O60281 2723 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 TRIM66O15016 1216 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 GREM1O60565 184 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 GABBR2O75899 941 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 ZDHHC11BP0C7U3 371 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 EPB41P11171 864 aaKnown RBP11.32□□□□□ -0.6
TUBE1-210ENST00000604967 CHRM1P11229 460 aaPredicted RBP11.32□□□□□ -0.6
TUBE1-210ENST00000604967 AVPR1AP37288 418 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 SLC5A3P53794 718 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 LRRC63Q05C16 580 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 DMWDQ09019 674 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 EML3Q32P44 896 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 ARHGAP29Q52LW3 1261 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 ZNF394Q53GI3 561 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 DCAF17Q5H9S7 520 aaPredicted RBP11.32□□□□□ -0.6
TUBE1-210ENST00000604967 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
TUBE1-210ENST00000604967 UNC93AQ86WB7 457 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 IRF2BP1Q8IU81 584 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 SFTPA1Q8IWL2 248 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 NUP93Q8N1F7 819 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 FBXL13Q8NEE6 735 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 SH3RF2Q8TEC5 729 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 FAM3CQ92520 227 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 NELL1Q92832 810 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 DHTKD1Q96HY7 919 aaPredicted RBP11.32□□□□□ -0.6
TUBE1-210ENST00000604967 GCNAQ96QF7 691 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 HNRNPABQ99729 332 aaKnown RBP11.32□□□□□ -0.6
TUBE1-210ENST00000604967 CHRDQ9H2X0 955 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 CCSER2Q9H7U1 834 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 LMAN1LQ9HAT1 526 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 CYP3A43Q9HB55 503 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 NMUR1Q9HB89 426 aa11.32□□□□□ -0.6
TUBE1-210ENST00000604967 HELZP42694 1942 aaKnown RBP11.32□□□□□ -0.6
TUBE1-210ENST00000604967 TRAV19A0A0A6YYK7 116 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 SOBPA7XYQ1 873 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 RNF225M0QZC1 329 aaPredicted RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 LEFTY2O00292 366 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 TULP2O00295 520 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 DPYSL4O14531 572 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 COCHO43405 550 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 TBX18O95935 607 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 CKMP06732 381 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 USP17L7P0C7H9 530 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 HDCP19113 662 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 ACO1P21399 889 aaKnown RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 RFX1P22670 979 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 RPS9P46781 194 aaKnown RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 FMO5P49326 533 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 MLLT6P55198 1093 aaPredicted RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 MAP3K7CLP57077 242 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 UBE2HP62256 183 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 SLC7A9P82251 487 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 APBA1Q02410 837 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 RUNX3Q13761 415 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 CCINQ13939 588 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 MTF1Q14872 753 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 PON2Q15165 354 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 FSTL4Q6MZW2 842 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 FILIP1Q7Z7B0 1213 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 TTC30AQ86WT1 665 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 YAF2Q8IY57 180 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 JAKMIP2Q96AA8 810 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 SMARCD1Q96GM5 515 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 TNIP3Q96KP6 325 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 CEP295NLQ96MC4 621 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 MED10Q9BTT4 135 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 DMAP1Q9NPF5 467 aaPredicted RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 PRMT8Q9NR22 394 aaPredicted RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 CISHQ9NSE2 258 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 SMPD4Q9NXE4 827 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 KIAA1468Q9P260 1216 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 UXTQ9UBK9 157 aaPredicted RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 ARMCX3Q9UH62 379 aaPredicted RBP11.31□□□□□ -0.6
TUBE1-210ENST00000604967 ARHGAP26Q9UNA1 814 aa11.31□□□□□ -0.6
TUBE1-210ENST00000604967 DMXL1Q9Y485 3027 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 FANCMQ8IYD8 2048 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 PRR23AA6NEV1 266 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 CYP26A1O43174 497 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 CLSTN1O94985 981 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TCF3P15923 654 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 ANXA13P27216 316 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 YWHAQP27348 245 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 GJA4P35212 333 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 SATB1Q01826 763 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 LRMPQ12912 555 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 ITPRIPL2Q3MIP1 535 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TMEM196Q5HYL7 178 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 TCERG1LQ5VWI1 586 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 SNX30Q5VWJ9 437 aa11.3□□□□□ -0.6
TUBE1-210ENST00000604967 CLEC17AQ6ZS10 378 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms