RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 LSM14BQ9BX40 385 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 VRTNQ9H8Y1 702 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 ZNF638Q14966 1978 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 ATP8B3O60423 1300 aa18.98■□□□□ 0.63
SHKBP1-227ENST00000602011 BCLAF3A2AJT9 711 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 F8VP50 259 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 DCLK1O15075 740 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 TGFB1I1O43294 461 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 CAVIN2O95810 425 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 HOXD13P35453 343 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 CYP24A1Q07973 514 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 BYSLQ13895 437 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 SCARA3Q6AZY7 606 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 NUDT18Q6ZVK8 323 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 RASSF3Q86WH2 238 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 NUP93Q8N1F7 819 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 RDH13Q8NBN7 331 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 TTC16Q8NEE8 873 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 KCNV2Q8TDN2 545 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 CNOT6LQ96LI5 555 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 MMP17Q9ULZ9 603 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 CEP295Q9C0D2 2601 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 PTPRJQ12913 1337 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 LAMA1P25391 3075 aa18.97■□□□□ 0.63
SHKBP1-227ENST00000602011 E2F8A0AVK6 867 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 A8MXQ7 604 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 K7ELQ4 463 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 K7EQS6 105 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 HCRTO43612 131 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 ADH1CP00326 375 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 OAS1P00973 400 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 YWHAQP27348 245 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 OPRD1P41143 372 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 DPP6P42658 865 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 SHC2P98077 582 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 TAF10Q12962 218 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 BMT2Q1RMZ1 405 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 MDH1BQ5I0G3 518 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 SPDYCQ5MJ68 293 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 RNF43Q68DV7 783 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 ATL3Q6DD88 541 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 TMEM174Q8WUU8 243 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 EZH1Q92800 747 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 CCDC127Q96BQ5 260 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 DHX58Q96C10 678 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 TNIP3Q96KP6 325 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 PNKPQ96T60 521 aa18.96■□□□□ 0.63
SHKBP1-227ENST00000602011 TNFRSF4P43489 277 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 TUBP50607 506 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 USP46P62068 366 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 EHHADHQ08426 723 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 DHCR24Q15392 516 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 CRY1Q16526 586 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 CCDC142Q17RM4 750 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 SNX30Q5VWJ9 437 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 DAB2IPQ5VWQ8 1189 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 B3GALNT2Q8NCR0 500 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 GLIS3Q8NEA6 775 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 SCFD1Q8WVM8 642 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 FAM84AQ96KN4 292 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 MRPL45Q9BRJ2 306 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 RNF38Q9H0F5 515 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 POLMQ9NP87 494 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 FAM13BQ9NYF5 915 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 INVSQ9Y283 1065 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 CPQQ9Y646 472 aa18.95■□□□□ 0.62
SHKBP1-227ENST00000602011 ANTXRLA6NF34 631 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 KHNYNO15037 678 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 PHACTR2O75167 634 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 KCNK5O95279 499 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 ABL1P00519 1130 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 APODP05090 189 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 P4HA1P13674 534 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 TRIM21P19474 475 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 GBP1P32455 592 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 GRIA2P42262 883 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 CREB5Q02930 508 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 KNOP1Q1ED39 458 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 C2orf27AQ580R0 203 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 EOGTQ5NDL2 527 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 PMS2CLQ68D20 193 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 FILIP1Q7Z7B0 1213 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 HPS3Q969F9 1004 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 TFIP11Q9UBB9 837 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 OBSL1O75147 1896 aa18.94■□□□□ 0.62
SHKBP1-227ENST00000602011 GIPC1O14908 333 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 CLIC2O15247 247 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 EXOC3O60645 756 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 CYP17A1P05093 508 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 MBL2P11226 248 aaPredicted RBP18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 CYP2J2P51589 502 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 CLDN10P78369 228 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 ZXDBP98169 803 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 GAD2Q05329 585 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 HECTD3Q5T447 861 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 PSAPL1Q6NUJ1 521 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 TRMT11Q7Z4G4 463 aaKnown RBP18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 IL37Q9NZH6 218 aa18.93■□□□□ 0.62
SHKBP1-227ENST00000602011 POLR2DO15514 142 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms