RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 NAGPAQ9UK23 515 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 YIPF1Q9Y548 306 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 ASB3Q9Y575 518 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 MYO16Q9Y6X6 1858 aa10.66□□□□□ -0.7
UPF1-213ENST00000601981 REV3LO60673 3130 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 DENND4CQ5VZ89 1909 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 DDX3XO00571 662 aaKnown RBP eCLIP10.65□□□□□ -0.7
UPF1-213ENST00000601981 MED7O43513 233 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 HCRTO43612 131 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 ATP2C2O75185 946 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 URI1O94763 535 aaPredicted RBP10.65□□□□□ -0.7
UPF1-213ENST00000601981 SLU7O95391 586 aaKnown RBP10.65□□□□□ -0.7
UPF1-213ENST00000601981 SEC24AO95486 1093 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 FGF19O95750 216 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 FAM200BP0CF97 657 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 HAPLN1P10915 354 aaPredicted RBP10.65□□□□□ -0.7
UPF1-213ENST00000601981 VDRP11473 427 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 BDNFP23560 247 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 GRIK1P39086 918 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 RAD23BP54727 409 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 TWF1Q12792 350 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 SMAD4Q13485 552 aaKnown RBP10.65□□□□□ -0.7
UPF1-213ENST00000601981 LEXMQ3ZCV2 418 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 ALKBH5Q6P6C2 394 aaKnown RBP10.65□□□□□ -0.7
UPF1-213ENST00000601981 TMC5Q6UXY8 1006 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 FAM35AQ86V20 835 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 SCN4BQ8IWT1 228 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 UBR7Q8N806 425 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 SLC4A11Q8NBS3 891 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 LEMD2Q8NC56 503 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 CYFIP2Q96F07 1278 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 ALS2CR12Q96Q35 445 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 PKMYT1Q99640 499 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 AGPAT1Q99943 283 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 DMAP1Q9NPF5 467 aaPredicted RBP10.65□□□□□ -0.7
UPF1-213ENST00000601981 FAM49BQ9NUQ9 324 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 TMLHEQ9NVH6 421 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 CLEC1BQ9P126 229 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 HMGXB4Q9UGU5 601 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 TFR2Q9UP52 801 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 SLC27A5Q9Y2P5 690 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 MRFAP1Q9Y605 127 aa10.65□□□□□ -0.7
UPF1-213ENST00000601981 DOCK6Q96HP0 2047 aa10.65□□□□□ -0.71
UPF1-213ENST00000601981 DENND4AQ7Z401 1863 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 A0A0A6YYK5 440 aaPredicted RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 MACROD2A1Z1Q3 448 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 H3BQ06 376 aaPredicted RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 CCL16O15467 120 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 CTIFO43310 598 aaKnown RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 RFPL2O75678 378 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 AP1G2O75843 785 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 H2AFZP0C0S5 128 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 CSH1P0DML2 217 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 CSH2P0DML3 217 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 PTPN2P17706 415 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 ACO1P21399 889 aaKnown RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 CYP2F1P24903 491 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 ADORA2BP29275 332 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 LTBRP36941 435 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 ORC1Q13415 861 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 CLUL1Q15846 466 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 CYP4A22Q5TCH4 519 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 ARHGAP17Q68EM7 881 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 SYCE2Q6PIF2 218 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 H2AFVQ71UI9 128 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 GPR149Q86SP6 731 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 SLC2A14Q8TDB8 520 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 EPS8L1Q8TE68 723 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 WHAMMQ8TF30 809 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 ATXN2LQ8WWM7 1075 aaKnown RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 MSLNLQ96KJ4 702 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 NOX5Q96PH1 765 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 GCNAQ96QF7 691 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 TWNKQ96RR1 684 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 HNRNPABQ99729 332 aaKnown RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 B3GNT5Q9BYG0 378 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 ASAH2Q9NR71 780 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 KRT82Q9NSB4 513 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 UXTQ9UBK9 157 aaPredicted RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 NOCTQ9UK39 431 aaKnown RBP10.64□□□□□ -0.71
UPF1-213ENST00000601981 CNTN6Q9UQ52 1028 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 NME7Q9Y5B8 376 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 DUSP10Q9Y6W6 482 aa10.64□□□□□ -0.71
UPF1-213ENST00000601981 NCANO14594 1321 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 DYNC1I1O14576 645 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 ZNF197O14709 1029 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 MOCS3O95396 460 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 PAPLNO95428 1278 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 CCDC130P13994 396 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 NPR3P17342 541 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 TNFAIP3P21580 790 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 GNA15P30679 374 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 PDE6CP51160 858 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 BCAT1P54687 386 aa10.63□□□□□ -0.71
UPF1-213ENST00000601981 MRPS5P82675 430 aaKnown RBP10.63□□□□□ -0.71
UPF1-213ENST00000601981 DLX2Q07687 328 aaPredicted RBP10.63□□□□□ -0.71
UPF1-213ENST00000601981 CBX2Q14781 532 aaPredicted RBP10.63□□□□□ -0.71
UPF1-213ENST00000601981 IFI16Q16666 785 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms