RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 TRPC7Q9HCX4 862 aa18.23■□□□□ 0.51
HERC3-214ENST00000601319 PNPLA8Q9NP80 782 aa18.23■□□□□ 0.51
HERC3-214ENST00000601319 FAM49BQ9NUQ9 324 aa18.23■□□□□ 0.51
HERC3-214ENST00000601319 ARHGAP26Q9UNA1 814 aa18.23■□□□□ 0.51
HERC3-214ENST00000601319 C2orf78A6NCI8 922 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 DCNP07585 359 aaKnown RBP18.22■□□□□ 0.51
HERC3-214ENST00000601319 FAM200BP0CF97 657 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 CD58P19256 250 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 TARSP26639 723 aaKnown RBP18.22■□□□□ 0.51
HERC3-214ENST00000601319 SLC5A3P53794 718 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 ZNF77Q15935 545 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 CAMK4Q16566 473 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 GPIHBP1Q8IV16 184 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 KIAA1958Q8N8K9 716 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 C12orf29Q8N999 325 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 ZMIZ2Q8NF64 920 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 SLC22A12Q96S37 553 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 SMOQ99835 787 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 FAM83CQ9BQN1 747 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 CISHQ9NSE2 258 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 RWDD2AQ9UIY3 292 aa18.22■□□□□ 0.51
HERC3-214ENST00000601319 CACNA1IQ9P0X4 2223 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 FAM170BA6NMN3 283 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 NCAM2O15394 837 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 P4HA2O15460 535 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 OAS1P00973 400 aaKnown RBP18.21■□□□□ 0.51
HERC3-214ENST00000601319 CD72P21854 359 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 YWHAQP27348 245 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 TAF10Q12962 218 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 SNX30Q5VWJ9 437 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 RALGPS2Q86X27 583 aaPredicted RBP18.21■□□□□ 0.51
HERC3-214ENST00000601319 TRIM59Q8IWR1 403 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 RIN3Q8TB24 985 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 ZFYVE19Q96K21 471 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 ARID3AQ99856 593 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 IER2Q9BTL4 223 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 MTF2Q9Y483 593 aaPredicted RBP18.21■□□□□ 0.51
HERC3-214ENST00000601319 WDR87Q6ZQQ6 2873 aa18.21■□□□□ 0.51
HERC3-214ENST00000601319 USP34Q70CQ2 3546 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 MYO15AQ9UKN7 3530 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 H0Y858 1186 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 FGFR1OPO95684 399 aaKnown RBP18.2■□□□□ 0.5
HERC3-214ENST00000601319 HDCP19113 662 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 TBXAS1P24557 533 aaPredicted RBP18.2■□□□□ 0.5
HERC3-214ENST00000601319 CTHP32929 405 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 TUBP50607 506 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 SLC7A9P82251 487 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 FZD5Q13467 585 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 CUL2Q13617 745 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 MTF1Q14872 753 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 PDGFRLQ15198 375 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 ANGPT1Q15389 498 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 ITPRIPL2Q3MIP1 535 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 CLEC20AQ6ZU45 233 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 ARL14EPQ8N8R7 260 aaPredicted RBP18.2■□□□□ 0.5
HERC3-214ENST00000601319 MLKLQ8NB16 471 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 FAM3CQ92520 227 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 FBXO32Q969P5 355 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 CYFIP2Q96F07 1278 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 FBXO44Q9H4M3 255 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 GTSE1Q9NYZ3 720 aa18.2■□□□□ 0.5
HERC3-214ENST00000601319 SPECC1L-ADORA2AF8WAN1 911 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 BEST1O76090 585 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 ZDHHC11BP0C7U3 371 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 ADORA2BP29275 332 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 KPNA1P52294 538 aaPredicted RBP18.19■□□□□ 0.5
HERC3-214ENST00000601319 RAD23BP54727 409 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 STX17P56962 302 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 MAP3K7CLP57077 242 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 YWHAEP62258 255 aaKnown RBP18.19■□□□□ 0.5
HERC3-214ENST00000601319 CETN1Q12798 172 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 CC2D1AQ6P1N0 951 aaPredicted RBP18.19■□□□□ 0.5
HERC3-214ENST00000601319 C1orf210Q8IVY1 113 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 UBR7Q8N806 425 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 SLC4A11Q8NBS3 891 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 SCAMP5Q8TAC9 235 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 TATDN2Q93075 761 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 TMEM176AQ96HP8 235 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 GBP4Q96PP9 640 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 CYP2S1Q96SQ9 504 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 HPS4Q9NQG7 708 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 GKN1Q9NS71 199 aa18.19■□□□□ 0.5
HERC3-214ENST00000601319 HHLA1C9JL84 531 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 CCDC192P0DO97 292 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 TNK2Q07912 1038 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 IFRD2Q12894 506 aaPredicted RBP18.18■□□□□ 0.5
HERC3-214ENST00000601319 RUNX3Q13761 415 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 ARHGAP17Q68EM7 881 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 SH3RF2Q8TEC5 729 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 OSCP1Q8WVF1 389 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 SRRTQ9BXP5 876 aaKnown RBP18.18■□□□□ 0.5
HERC3-214ENST00000601319 NUP62CLQ9H1M0 184 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 CHRDQ9H2X0 955 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 LMBRD1Q9NUN5 540 aa18.18■□□□□ 0.5
HERC3-214ENST00000601319 PROB1E7EW31 1015 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 NBL1P41271 181 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 ZNF394Q53GI3 561 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 PPP1R26Q5T8A7 1209 aaPredicted RBP18.17■□□□□ 0.5
HERC3-214ENST00000601319 MAMSTRQ6ZN01 415 aa18.17■□□□□ 0.5
HERC3-214ENST00000601319 DDX42Q86XP3 938 aaKnown RBP eCLIP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms