RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 B3GALNT2Q8NCR0 500 aa19.16■□□□□ 0.66
CHMP2A-208ENST00000601220 ACDQ96AP0 544 aa19.16■□□□□ 0.66
CHMP2A-208ENST00000601220 CGNQ9P2M7 1197 aaKnown RBP19.16■□□□□ 0.66
CHMP2A-208ENST00000601220 CPQQ9Y646 472 aa19.16■□□□□ 0.66
CHMP2A-208ENST00000601220 A8MXQ7 604 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 KLRC4O43908 158 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 CDH8P55286 799 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 TNNC1P63316 161 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 KNOP1Q1ED39 458 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 AASDHQ4L235 1098 aaPredicted RBP19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 FOXD4L5Q5VV16 416 aaPredicted RBP19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 TDRD10Q5VZ19 366 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 RHBDF2Q6PJF5 856 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 RASSF3Q86WH2 238 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 SFTPA1Q8IWL2 248 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 TMEM174Q8WUU8 243 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 FOXD4L4Q8WXT5 416 aaPredicted RBP19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 ELOVL4Q9GZR5 314 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 DMAC2Q9NW81 257 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 IL37Q9NZH6 218 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 NXF1Q9UBU9 619 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 TPRP12270 2363 aaKnown RBP19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 ACACBO00763 2458 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 SDK1Q7Z5N4 2213 aa19.15■□□□□ 0.66
CHMP2A-208ENST00000601220 PTPRDP23468 1912 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 ZNF638Q14966 1978 aaKnown RBP19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 A0A0A0MRY4 1105 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 TNFRSF10BO14763 440 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 C4BPAP04003 597 aaKnown RBP19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 ZSCAN22P10073 491 aaPredicted RBP19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 MPLP40238 635 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 SLC6A11P48066 632 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 PSMD2Q13200 908 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 TRPC3Q13507 836 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 DHCR24Q15392 516 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 GRAMD1CQ8IYS0 662 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 NUP93Q8N1F7 819 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 C12orf50Q8NA57 414 aaPredicted RBP19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 PARD3BQ8TEW8 1205 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 SYAP1Q96A49 352 aaPredicted RBP19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 ZFRQ96KR1 1074 aaKnown RBP19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 KCNK16Q96T55 309 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 SMYD3Q9H7B4 428 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 VPS45Q9NRW7 570 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 SMPD4Q9NXE4 827 aa19.14■□□□□ 0.65
CHMP2A-208ENST00000601220 ATG2BQ96BY7 2078 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 LRRIQ3A6PVS8 624 aaPredicted RBP19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 SCAMP3O14828 347 aaKnown RBP19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 EXOC3O60645 756 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 VNN1O95497 513 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 F13A1P00488 732 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 HNRNPLP14866 589 aaKnown RBP eCLIP19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 YWHAQP27348 245 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 AFMP43652 599 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 SEC13P55735 322 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 STK4Q13043 487 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 FOXD4L6Q3SYB3 417 aaPredicted RBP19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 C2orf27AQ580R0 203 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 STPG1Q5TH74 334 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 SNX30Q5VWJ9 437 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 FOXD4L3Q6VB84 417 aaPredicted RBP19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 CCDC26Q8TAB7 109 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 DDX1Q92499 740 aaKnown RBP19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 ELMO3Q96BJ8 720 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 SDCBP2Q9H190 292 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 CFAP97Q9P2B7 532 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 MMP17Q9ULZ9 603 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 EML5Q05BV3 1969 aa19.13■□□□□ 0.65
CHMP2A-208ENST00000601220 KMT2BQ9UMN6 2715 aaPredicted RBP19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 FAM92AA1XBS5 289 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 BCLAF3A2AJT9 711 aaKnown RBP19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 RHOBTB1O94844 696 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 ABL1P00519 1130 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 ZDHHC11BP0C7U3 371 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 DGKEP52429 567 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 IL31Q6EBC2 164 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 TCEAL6Q6IPX3 200 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 C12orf40Q86WS4 652 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 KIAA0895Q8NCT3 520 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 TSTD1Q8NFU3 115 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 SCAMP5Q8TAC9 235 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 OVCA2Q8WZ82 227 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 TCEAL3Q969E4 200 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 SLITRK1Q96PX8 696 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 CHORDC1Q9UHD1 332 aaPredicted RBP19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 RCOR1Q9UKL0 485 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 INVSQ9Y283 1065 aa19.12■□□□□ 0.65
CHMP2A-208ENST00000601220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 SLC9A3R1O14745 358 aaPredicted RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 COCHO43405 550 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 ACTN4O43707 911 aaKnown RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 RTN3O95197 1032 aaPredicted RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 SLFN14P0C7P3 912 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 EIF2DP41214 584 aaKnown RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 AP3M2P53677 418 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 MRPS21P82921 87 aaKnown RBP19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 PKP1Q13835 747 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 ELF2Q15723 593 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 CRY1Q16526 586 aa19.11■□□□□ 0.65
CHMP2A-208ENST00000601220 N4BP2L1Q5TBK1 243 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms