RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ACTN4O43707 911 aaKnown RBP18.08■□□□□ 0.48
SCAF1-204ENST00000601038 AKAP3O75969 853 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 OAS1P00973 400 aaKnown RBP18.08■□□□□ 0.48
SCAF1-204ENST00000601038 RAP1GAPP47736 663 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 CACNA2D1P54289 1103 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 STK4Q13043 487 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 BIRC3Q13489 604 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 SLC9A9Q8IVB4 645 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 ACDQ96AP0 544 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 PAGE5Q96GU1 130 aa18.08■□□□□ 0.48
SCAF1-204ENST00000601038 POLR3BQ9NW08 1133 aaPredicted RBP18.08■□□□□ 0.48
SCAF1-204ENST00000601038 LRRIQ3A6PVS8 624 aaPredicted RBP18.07■□□□□ 0.48
SCAF1-204ENST00000601038 CLDN5O00501 218 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 AXIN1O15169 862 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 ABL1P00519 1130 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 C4BPAP04003 597 aaKnown RBP18.07■□□□□ 0.48
SCAF1-204ENST00000601038 CCDC192P0DO97 292 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 ZNF699Q32M78 642 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 ZNF667Q5HYK9 610 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 KBTBD6Q86V97 674 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 ADGRG2Q8IZP9 1017 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 NUP93Q8N1F7 819 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 KIAA0895Q8NCT3 520 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 ZC3H10Q96K80 434 aaKnown RBP18.07■□□□□ 0.48
SCAF1-204ENST00000601038 HHIPQ96QV1 700 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 EXOC1Q9NV70 894 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 EBF1Q9UH73 591 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 CPQQ9Y646 472 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 HELZP42694 1942 aaKnown RBP18.07■□□□□ 0.48
SCAF1-204ENST00000601038 SPAG17Q6Q759 2223 aa18.07■□□□□ 0.48
SCAF1-204ENST00000601038 DNAH14Q0VDD8 3507 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 SLC9A3R1O14745 358 aaPredicted RBP18.06■□□□□ 0.48
SCAF1-204ENST00000601038 RTN3O95197 1032 aaPredicted RBP18.06■□□□□ 0.48
SCAF1-204ENST00000601038 YWHAQP27348 245 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 OPRD1P41143 372 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 CDH8P55286 799 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 NCOA4Q13772 614 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 DMC1Q14565 340 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 KMT5BQ4FZB7 885 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 FILIP1Q7Z7B0 1213 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 PDZD8Q8NEN9 1154 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 OVCA2Q8WZ82 227 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 TNIP3Q96KP6 325 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 KCNK16Q96T55 309 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 ARRDC1-AS1Q9H2J1 176 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 KCTD10Q9H3F6 313 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 SMYD3Q9H7B4 428 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 USP25Q9UHP3 1055 aa18.06■□□□□ 0.48
SCAF1-204ENST00000601038 ATP8B3O60423 1300 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 PDXKO00764 312 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 GDF9O60383 454 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 EPN2O95208 641 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 VNN1O95497 513 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 APBB3O95704 486 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 RPN1P04843 607 aaKnown RBP18.05■□□□□ 0.48
SCAF1-204ENST00000601038 MYL1P05976 194 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 ZNF806P0C7X5 589 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 CMA1P23946 247 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 IFRD2Q12894 506 aaPredicted RBP18.05■□□□□ 0.48
SCAF1-204ENST00000601038 SGSM1Q2NKQ1 1148 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 GAB4Q2WGN9 574 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 DDX42Q86XP3 938 aaKnown RBP eCLIP18.05■□□□□ 0.48
SCAF1-204ENST00000601038 USP33Q8TEY7 942 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 SMPD4Q9NXE4 827 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 PCDHGA5Q9Y5G8 931 aa18.05■□□□□ 0.48
SCAF1-204ENST00000601038 A0A1B0GVL5 298 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 K7EQS6 105 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 CLSTN1O94985 981 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 NR3C1P04150 777 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 CYP17A1P05093 508 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 MBL2P11226 248 aaPredicted RBP18.04■□□□□ 0.48
SCAF1-204ENST00000601038 PFKFB1P16118 471 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 DHCR24Q15392 516 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 ZACNQ401N2 412 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 PLK5Q496M5 336 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 SNX30Q5VWJ9 437 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 PAQR9Q6ZVX9 377 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 FAM35AQ86V20 835 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 SPRYD3Q8NCJ5 442 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 TMC2Q8TDI7 906 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 FBXO32Q969P5 355 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 SMARCD1Q96GM5 515 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 MED10Q9BTT4 135 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 SDCBP2Q9H190 292 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 IL37Q9NZH6 218 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 CFAP97Q9P2B7 532 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 TBC1D14Q9P2M4 693 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 EML5Q05BV3 1969 aa18.04■□□□□ 0.48
SCAF1-204ENST00000601038 TNFRSF10BO14763 440 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 IKBKBO14920 756 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 P4HA1P13674 534 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 DLG4P78352 724 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 C2orf27AQ580R0 203 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 PLA2G2CQ5R387 149 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 FUKQ8N0W3 1084 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 C12orf50Q8NA57 414 aaPredicted RBP18.03■□□□□ 0.48
SCAF1-204ENST00000601038 SCAMP5Q8TAC9 235 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 TAF4BQ92750 862 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 ELMO3Q96BJ8 720 aa18.03■□□□□ 0.48
SCAF1-204ENST00000601038 DMAP1Q9NPF5 467 aaPredicted RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms