RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 NUP93Q8N1F7 819 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 EFHBQ8N7U6 833 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 GAS2L1Q99501 681 aaPredicted RBP15.13■□□□□ 0.01
UPF1-211ENST00000600868 LRRC4Q9HBW1 653 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 ST7Q9NRC1 585 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 IL37Q9NZH6 218 aa15.13■□□□□ 0.01
UPF1-211ENST00000600868 RTN3O95197 1032 aaPredicted RBP15.12■□□□□ 0.01
UPF1-211ENST00000600868 IPO7O95373 1038 aaKnown RBP15.12■□□□□ 0.01
UPF1-211ENST00000600868 PAPLNO95428 1278 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 LRG1P02750 347 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 CALB1P05937 261 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 POU2F2P09086 479 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 CSH1P0DML2 217 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 CSH2P0DML3 217 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 SLC5A3P53794 718 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 EPHB3P54753 998 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 TWF1Q12792 350 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 PTP4A2Q12974 167 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 VEPH1Q14D04 833 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 PPM1LQ5SGD2 360 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 SDHAF4Q5VUM1 108 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 DENND5BQ6ZUT9 1274 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 GPRIN1Q7Z2K8 1008 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 MCOLN2Q8IZK6 566 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 IPO4Q8TEX9 1081 aaKnown RBP15.12■□□□□ 0.01
UPF1-211ENST00000600868 CASP10Q92851 521 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 C18orf8Q96DM3 657 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 ZNF830Q96NB3 372 aaPredicted RBP15.12■□□□□ 0.01
UPF1-211ENST00000600868 EHD2Q9NZN4 543 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 ADAM22Q9P0K1 906 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 INTUQ9ULD6 942 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 STRIP2Q9ULQ0 834 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 ASB3Q9Y575 518 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 USP3Q9Y6I4 520 aa15.12■□□□□ 0.01
UPF1-211ENST00000600868 FAM92AA1XBS5 289 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 ANKRD62A6NC57 917 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 SLC38A8A6NNN8 435 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 E5RJQ4 531 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 NCK2O43639 380 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 FBXO21O94952 628 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 ERBB2P04626 1255 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 HNRNPA1P09651 372 aaKnown RBP eCLIP15.11■□□□□ 0.01
UPF1-211ENST00000600868 MYBL1P10243 752 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 LCP1P13796 627 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 GTF2F1P35269 517 aaKnown RBP eCLIP15.11■□□□□ 0.01
UPF1-211ENST00000600868 TKTL1P51854 596 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 GSCP56915 257 aaPredicted RBP15.11■□□□□ 0.01
UPF1-211ENST00000600868 KRT83P78385 493 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 ADIGQ0VDE8 80 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 LLGL2Q6P1M3 1020 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 MMS22LQ6ZRQ5 1243 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 ITIH5Q86UX2 942 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 ZDHHC17Q8IUH5 632 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 SIX6OS1Q8N1H7 587 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 SCML4Q8N228 414 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 VN1R2Q8NFZ6 395 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 GIPC2Q8TF65 315 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 PSMG2Q969U7 264 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 TRIM11Q96F44 468 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 FAM161BQ96MY7 647 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 C11orf70Q9BRQ4 267 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 TTLL2Q9BWV7 592 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 FBXO44Q9H4M3 255 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 IGFLR1Q9H665 355 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 SYNCQ9H7C4 482 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 LUC7LQ9NQ29 371 aaKnown RBP15.11■□□□□ 0.01
UPF1-211ENST00000600868 CNGB3Q9NQW8 809 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 DZANK1Q9NVP4 752 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 ZDHHC7Q9NXF8 308 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 WDR35Q9P2L0 1181 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 PCDHA13Q9Y5I0 950 aa15.11■□□□□ 0.01
UPF1-211ENST00000600868 GREB1Q4ZG55 1949 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 PAPSS1O43252 624 aaPredicted RBP15.1■□□□□ 0.01
UPF1-211ENST00000600868 ZBED1O96006 694 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 H2AFZP0C0S5 128 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 SRGAP2BP0DMP2 458 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 IGFBP4P22692 258 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 MAGEA1P43355 309 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 GALCP54803 685 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 ADAM15Q13444 863 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 ZNF268Q14587 947 aaPredicted RBP15.1■□□□□ 0.01
UPF1-211ENST00000600868 HS1BP3Q53T59 392 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 PM20D1Q6GTS8 502 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 TOGARAM2Q6ZUX3 1019 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 H2AFVQ71UI9 128 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 DNAJB7Q7Z6W7 309 aaPredicted RBP15.1■□□□□ 0.01
UPF1-211ENST00000600868 SCUBE3Q8IX30 993 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 SCAMP5Q8TAC9 235 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 GPR152Q8TDT2 470 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 TRMT2BQ96GJ1 504 aaKnown RBP15.1■□□□□ 0.01
UPF1-211ENST00000600868 MYRFLQ96LU7 910 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 TJP2Q9UDY2 1190 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 SCML2Q9UQR0 700 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 REXO2Q9Y3B8 237 aaKnown RBP15.1■□□□□ 0.01
UPF1-211ENST00000600868 NCANO14594 1321 aa15.1■□□□□ 0.01
UPF1-211ENST00000600868 PIK3R2O00459 728 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 SART1O43290 800 aaKnown RBP15.09■□□□□ 0.01
UPF1-211ENST00000600868 RFPL2O75678 378 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 GLP2RO95838 553 aa15.09■□□□□ 0.01
UPF1-211ENST00000600868 HMGA1P17096 107 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms