RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 CEBPBP17676 345 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 YWHAQP27348 245 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 SSTR3P32745 418 aaPredicted RBP20.42■□□□□ 0.86
UPF1-209ENST00000600310 PLA2G4AP47712 749 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 PLCB2Q00722 1185 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 ZP2Q05996 745 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 GPRIN1Q7Z2K8 1008 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 NPAS3Q8IXF0 933 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 TDRD5Q8NAT2 981 aaKnown RBP20.42■□□□□ 0.86
UPF1-209ENST00000600310 ING5Q8WYH8 240 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 SECISBP2LQ93073 1101 aaKnown RBP20.42■□□□□ 0.86
UPF1-209ENST00000600310 ACSF2Q96CM8 615 aaPredicted RBP20.42■□□□□ 0.86
UPF1-209ENST00000600310 IQCDQ96DY2 449 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 RPGRIP1Q96KN7 1286 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 GCNAQ96QF7 691 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 FBXO44Q9H4M3 255 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 PCDHGC3Q9UN70 934 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 ZFP37Q9Y6Q3 630 aaPredicted RBP20.42■□□□□ 0.86
UPF1-209ENST00000600310 ITIH6Q6UXX5 1313 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 NOTCH4Q99466 2003 aa20.42■□□□□ 0.86
UPF1-209ENST00000600310 DOCK6Q96HP0 2047 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 C2CD4DB7Z1M9 353 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 LOC730098B7Z3J9 87 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 TULP2O00295 520 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 AP5Z1O43299 807 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 TADA3O75528 432 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 GBP2P32456 591 aaPredicted RBP20.41■□□□□ 0.86
UPF1-209ENST00000600310 GPD2P43304 727 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 PPP3CCP48454 512 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 PDE6CP51160 858 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 KIF11P52732 1056 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 TAF10Q12962 218 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 TEAD2Q15562 447 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 RAB41Q5JT25 222 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 DENND1BQ6P3S1 775 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 EPS8L1Q8TE68 723 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 KCTD13Q8WZ19 329 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 DDX1Q92499 740 aaKnown RBP20.41■□□□□ 0.86
UPF1-209ENST00000600310 SLITRK1Q96PX8 696 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 GDE1Q9NZC3 331 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 EPS15L1Q9UBC2 864 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 USP3Q9Y6I4 520 aa20.41■□□□□ 0.86
UPF1-209ENST00000600310 A0A1W2PQJ5 194 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 C19orf67A6NJJ6 358 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 NCANO14594 1321 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 CFHP08603 1231 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 LAMP2P13473 410 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 SP100P23497 879 aaPredicted RBP20.4■□□□□ 0.86
UPF1-209ENST00000600310 KRT9P35527 623 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 IFRD2Q12894 506 aaPredicted RBP20.4■□□□□ 0.86
UPF1-209ENST00000600310 POTEHQ6S545 545 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 DENND4AQ7Z401 1863 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 NOP9Q86U38 636 aaKnown RBP20.4■□□□□ 0.86
UPF1-209ENST00000600310 FMNL3Q8IVF7 1028 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 ZDHHC14Q8IZN3 488 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 PLCD3Q8N3E9 789 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 OVCA2Q8WZ82 227 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 FBXO32Q969P5 355 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 HSFY1Q96LI6 401 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 LHX5Q9H2C1 402 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 SCML2Q9UQR0 700 aa20.4■□□□□ 0.86
UPF1-209ENST00000600310 SOBPA7XYQ1 873 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 FERP16591 822 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 CYP4F8P98187 520 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 ARHGAP15Q53QZ3 475 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 PMF1Q6P1K2 205 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 ZNF677Q86XU0 584 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 PDZD8Q8NEN9 1154 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 STK32AQ8WU08 396 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 MRPS31Q92665 395 aaKnown RBP20.39■□□□□ 0.85
UPF1-209ENST00000600310 MCRS1Q96EZ8 462 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 TRIM5Q9C035 493 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 TASP1Q9H6P5 420 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 LRRC4Q9HBW1 653 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 TRPM5Q9NZQ8 1165 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 ZMYM5Q9UJ78 669 aa20.39■□□□□ 0.85
UPF1-209ENST00000600310 NOCTQ9UK39 431 aaKnown RBP20.39■□□□□ 0.85
UPF1-209ENST00000600310 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.39■□□□□ 0.857e-8■■□□□ 12.6
UPF1-209ENST00000600310 ZNF840PA6NDX5 716 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 LRRC53A6NM62 1247 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 CCDC172P0C7W6 258 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 DDX6P26196 483 aaKnown RBP eCLIP20.38■□□□□ 0.85
UPF1-209ENST00000600310 RPL34P49207 117 aaKnown RBP20.38■□□□□ 0.85
UPF1-209ENST00000600310 GPR158Q5T848 1215 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 SPECC1LQ69YQ0 1117 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 CCDC186Q7Z3E2 898 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 VSTM4Q8IW00 320 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 WDTC1Q8N5D0 677 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 AIPL1Q9NZN9 384 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 CAPN11Q9UMQ6 739 aa20.38■□□□□ 0.85
UPF1-209ENST00000600310 GABBR2O75899 941 aa20.37■□□□□ 0.85
UPF1-209ENST00000600310 GYPCP04921 128 aa20.37■□□□□ 0.85
UPF1-209ENST00000600310 ZDHHC11BP0C7U3 371 aa20.37■□□□□ 0.85
UPF1-209ENST00000600310 CDH5P33151 784 aaPredicted RBP20.37■□□□□ 0.85
UPF1-209ENST00000600310 RGS7P49802 495 aa20.37■□□□□ 0.85
UPF1-209ENST00000600310 TKTL1P51854 596 aa20.37■□□□□ 0.85
UPF1-209ENST00000600310 CDR2Q01850 454 aa20.37■□□□□ 0.85
UPF1-209ENST00000600310 ARID5AQ03989 594 aa20.37■□□□□ 0.85
UPF1-209ENST00000600310 STXBP5Q5T5C0 1151 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms