RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 RARBP10826 455 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 TFE3P19532 575 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 CYP3A5P20815 502 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 PROZP22891 400 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 SDC4P31431 198 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 MOGSQ13724 837 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 HHATQ5VTY9 493 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 CROCCP2Q86T23 111 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 RPAINQ86UA6 219 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZCCHC9Q8N567 271 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 UBR7Q8N806 425 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 SLCO1B3Q9NPD5 702 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 RECQL4O94761 1208 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 CELF2O95319 508 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 APRTP07741 180 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 GPD2P43304 727 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 IFRD2Q12894 506 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 ACVR2BQ13705 512 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 TRIM56Q9BRZ2 755 aaKnown RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 C16orf70Q9BSU1 422 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 ROPN1BQ9BZX4 212 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 RNF39Q9H2S5 420 aa12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 ROPN1Q9HAT0 212 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
ARHGEF1-220ENST00000600274 WDR81Q562E7 1941 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 ADCY6O43306 1168 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 HMGCRP04035 888 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 BCAR1P56945 870 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 ROR1Q01973 937 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 SLC25A11Q02978 314 aaKnown RBP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 DGKDQ16760 1214 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 CA9Q16790 459 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 CASC4Q6P4E1 433 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PDIK1LQ8N165 341 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 MICAL1Q8TDZ2 1067 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 FBF1Q8TES7 1133 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PCDHGC3Q9UN70 934 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZBED1O96006 694 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 VDRP11473 427 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 KRT4P19013 534 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 ARL4CP56559 192 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 TAP1Q03518 808 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 STAT4Q14765 748 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PAN2Q504Q3 1202 aaKnown RBP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 TWF2Q6IBS0 349 aaKnown RBP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 FAM131BQ86XD5 332 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCDC63Q8NA47 563 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCDC110Q8TBZ0 833 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 KCNV2Q8TDN2 545 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PITPNM3Q9BZ71 974 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 TMEM63AO94886 807 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 LMO2P25791 158 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 SCTRP47872 440 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 IRX4P78413 519 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 TRIM68Q6AZZ1 485 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPP1R2P3Q6NXS1 205 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 ARHGEF18Q6ZSZ5 1173 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 USP50Q70EL3 339 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPTC7Q8NI37 304 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 NPLOC4Q8TAT6 608 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 ZNF317Q96PQ6 595 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 TINF2Q9BSI4 451 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 GCOM2Q9BZD3 368 aaPredicted RBP12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 L3MBTL1Q9Y468 752 aa12.05□□□□□ -0.48
ARHGEF1-220ENST00000600274 TRUB2O95900 331 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 MMP3P08254 477 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 BIRC2Q13490 618 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 ANKRD20A8PQ5CZ79 823 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 TRNP1Q6NT89 227 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 CYB5D1Q6P9G0 228 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 SPATS2Q86XZ4 545 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 CPT1BQ92523 772 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 SLCO2A1Q92959 643 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 MED10Q9BTT4 135 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 SNX25Q9H3E2 840 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 DCTN4Q9UJW0 460 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCT8L1PA6NM43 557 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 CLDN5O00501 218 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 RBL1P28749 1068 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 RPA3P35244 121 aaPredicted RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 MSH2P43246 934 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 OVGP1Q12889 678 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 NME3Q13232 169 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 OASLQ15646 514 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 CCL14Q16627 93 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 SPDYCQ5MJ68 293 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 PPP1R15BQ5SWA1 713 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 TTC30AQ86WT1 665 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 ADAM32Q8TC27 787 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 MAML3Q96JK9 1138 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 ASB7Q9H672 318 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 PCDH9Q9HC56 1237 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 GEMIN8Q9NWZ8 242 aaKnown RBP12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 TREHO43280 583 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 UBOX5O94941 541 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 PAEPP09466 180 aa12.04□□□□□ -0.48
ARHGEF1-220ENST00000600274 ELK3P41970 407 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms