RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 TMEM270Q6UE05 265 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 TPRG1Q6ZUI0 275 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 ARHGEF19Q8IW93 802 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 CSGALNACT1Q8TDX6 532 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 KAT5Q92993 513 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 ZFYVE19Q96K21 471 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 DUSP16Q9BY84 665 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 FBXO44Q9H4M3 255 aa29.81■■■□□ 2.36
SSBP4-206ENST00000599699 CHORDC1Q9UHD1 332 aaPredicted RBP29.81■■■□□ 2.36
SSBP4-206ENST00000599699 SGO2Q562F6 1265 aa29.8■■■□□ 2.36
SSBP4-206ENST00000599699 PHLDB3Q6NSJ2 640 aa29.8■■■□□ 2.36
SSBP4-206ENST00000599699 UBR7Q8N806 425 aa29.8■■■□□ 2.36
SSBP4-206ENST00000599699 OVCA2Q8WZ82 227 aa29.8■■■□□ 2.36
SSBP4-206ENST00000599699 ANO10Q9NW15 660 aa29.8■■■□□ 2.36
SSBP4-206ENST00000599699 GREB1Q4ZG55 1949 aa29.8■■■□□ 2.36
SSBP4-206ENST00000599699 NUP210Q8TEM1 1887 aaPredicted RBP29.79■■■□□ 2.36
SSBP4-206ENST00000599699 PRKCSHP14314 528 aaPredicted RBP29.79■■■□□ 2.36
SSBP4-206ENST00000599699 AOC1P19801 751 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 SLC8A3P57103 927 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 STARD6P59095 220 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 GCNT1Q02742 428 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 ZNF268Q14587 947 aaPredicted RBP29.79■■■□□ 2.36
SSBP4-206ENST00000599699 STX1AQ16623 288 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 MAN2A1Q16706 1144 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 ARHGAP17Q68EM7 881 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 CC2D1AQ6P1N0 951 aaPredicted RBP29.79■■■□□ 2.36
SSBP4-206ENST00000599699 GBP6Q6ZN66 633 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 TMEM105Q8N8V8 129 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 IL37Q9NZH6 218 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 GMIPQ9P107 970 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 NFE2L3Q9Y4A8 694 aa29.79■■■□□ 2.36
SSBP4-206ENST00000599699 PFKLP17858 780 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 ACO1P21399 889 aaKnown RBP29.78■■■□□ 2.36
SSBP4-206ENST00000599699 PLCB2Q00722 1185 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 GOLGA7BQ2TAP0 167 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 GPRIN1Q7Z2K8 1008 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 TUBGCP2Q9BSJ2 902 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 FOXQ1Q9C009 403 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 UBE2TQ9NPD8 197 aaPredicted RBP29.78■■■□□ 2.36
SSBP4-206ENST00000599699 TRPV5Q9NQA5 729 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 SAMSN1Q9NSI8 373 aaKnown RBP29.78■■■□□ 2.36
SSBP4-206ENST00000599699 OBSL1O75147 1896 aa29.78■■■□□ 2.36
SSBP4-206ENST00000599699 DENND4CQ5VZ89 1909 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 KCNJ18B7U540 433 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 PES1O00541 588 aaKnown RBP29.77■■■□□ 2.36
SSBP4-206ENST00000599699 PI15O43692 258 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 VDRP11473 427 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 CD72P21854 359 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 KCNJ12Q14500 433 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 UBXN2BQ14CS0 331 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 EXOC3L4Q17RC7 722 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 TTC8Q8TAM2 541 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 ENOX1Q8TC92 643 aaKnown RBP29.77■■■□□ 2.36
SSBP4-206ENST00000599699 PNPLA8Q9NP80 782 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 GKN1Q9NS71 199 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 HESX1Q9UBX0 185 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 KIAA1257Q9ULG3 409 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 SIT1Q9Y3P8 196 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 PIAS3Q9Y6X2 628 aa29.77■■■□□ 2.36
SSBP4-206ENST00000599699 KANSL1LA0AUZ9 987 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 HHLA1C9JL84 531 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 PAEPP09466 180 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 KPNA1P52294 538 aaPredicted RBP29.76■■■□□ 2.35
SSBP4-206ENST00000599699 TRIM65Q6PJ69 517 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 ZNF852Q6ZMS4 543 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 ANKRD52Q8NB46 1076 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 RBBP8NLQ8NC74 664 aaPredicted RBP29.76■■■□□ 2.35
SSBP4-206ENST00000599699 SH3RF2Q8TEC5 729 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 TMEM63CQ9P1W3 806 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 TSPAN16Q9UKR8 245 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 ARHGAP26Q9UNA1 814 aa29.76■■■□□ 2.35
SSBP4-206ENST00000599699 MYH10P35580 1976 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 ARNTLO00327 626 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 KRT5P13647 590 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 SLC9A1P19634 815 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 VWA3BQ502W6 1294 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 HECTD3Q5T447 861 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 CAVIN1Q6NZI2 390 aaKnown RBP29.75■■■□□ 2.35
SSBP4-206ENST00000599699 C11orf57Q6ZUT1 292 aaPredicted RBP29.75■■■□□ 2.35
SSBP4-206ENST00000599699 KREMEN1Q96MU8 473 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 RNF38Q9H0F5 515 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 NDST4Q9H3R1 872 aa29.75■■■□□ 2.35
SSBP4-206ENST00000599699 TLR8Q9NR97 1041 aaKnown RBP29.75■■■□□ 2.35
SSBP4-206ENST00000599699 FAM92AA1XBS5 289 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 GTPBP10A4D1E9 387 aaKnown RBP29.74■■■□□ 2.35
SSBP4-206ENST00000599699 OAS1P00973 400 aaKnown RBP29.74■■■□□ 2.35
SSBP4-206ENST00000599699 MBL2P11226 248 aaPredicted RBP29.74■■■□□ 2.35
SSBP4-206ENST00000599699 MFAP3P55082 362 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 MTF1Q14872 753 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 PJA1Q8NG27 643 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 DDX23Q9BUQ8 820 aaKnown RBP29.74■■■□□ 2.35
SSBP4-206ENST00000599699 NACA2Q9H009 215 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 SMPD4Q9NXE4 827 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 GTSE1Q9NYZ3 720 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 SCML2Q9UQR0 700 aa29.74■■■□□ 2.35
SSBP4-206ENST00000599699 MRPS17Q9Y2R5 130 aaKnown RBP29.74■■■□□ 2.35
SSBP4-206ENST00000599699 FAM170BA6NMN3 283 aa29.73■■■□□ 2.35
SSBP4-206ENST00000599699 RNF225M0QZC1 329 aaPredicted RBP29.73■■■□□ 2.35
SSBP4-206ENST00000599699 MAN2B1O00754 1011 aa29.73■■■□□ 2.35
SSBP4-206ENST00000599699 CYP26A1O43174 497 aa29.73■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms