RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TCF3P15923 654 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 TGM1P22735 817 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 GALK1P51570 392 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 STK4Q13043 487 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 NR1H3Q13133 447 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 PSMD2Q13200 908 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 FBXO43Q4G163 708 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 CD101Q93033 1021 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 SLITRK1Q96PX8 696 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 ZNF518BQ9C0D4 1074 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 SMYD3Q9H7B4 428 aa19.93■□□□□ 0.78
PNKP-213ENST00000599543 FBRSL1Q9HCM7 1045 aaKnown RBP19.93■□□□□ 0.78
PNKP-213ENST00000599543 ZNF840PA6NDX5 716 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 LRRIQ3A6PVS8 624 aaPredicted RBP19.92■□□□□ 0.78
PNKP-213ENST00000599543 NFATC1O95644 943 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 ABL1P00519 1130 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 HOXC13P31276 330 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 IFRD2Q12894 506 aaPredicted RBP19.92■□□□□ 0.78
PNKP-213ENST00000599543 NCOA4Q13772 614 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 ZNF667Q5HYK9 610 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 NAIF1Q69YI7 327 aaPredicted RBP19.92■□□□□ 0.78
PNKP-213ENST00000599543 SCARA5Q6ZMJ2 495 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 PLEKHO2Q8TD55 490 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 PARD3BQ8TEW8 1205 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 VRTNQ9H8Y1 702 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 ATP8B3O60423 1300 aa19.92■□□□□ 0.78
PNKP-213ENST00000599543 CCDC163A0A0D9SF12 145 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 MED19A0JLT2 244 aaPredicted RBP19.91■□□□□ 0.78
PNKP-213ENST00000599543 LEFTY2O00292 366 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 CLDN5O00501 218 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 MYL1P05976 194 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 PXNP49023 591 aaPredicted RBP19.91■□□□□ 0.78
PNKP-213ENST00000599543 CACNA2D1P54289 1103 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 CLDN10P78369 228 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 DPYDQ12882 1025 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 TAF10Q12962 218 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 SLC9A9Q8IVB4 645 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 FAM160A2Q8N612 972 aaPredicted RBP19.91■□□□□ 0.78
PNKP-213ENST00000599543 RPLP0P6Q8NHW5 317 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 B3GNT5Q9BYG0 378 aa19.91■□□□□ 0.78
PNKP-213ENST00000599543 PDXKO00764 312 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 RPP40O75818 363 aaKnown RBP19.9■□□□□ 0.78
PNKP-213ENST00000599543 NR3C1P04150 777 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 CCDC192P0DO97 292 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 P4HA1P13674 534 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 RAP1GAPP47736 663 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 SLC7A9P82251 487 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 ZXDBP98169 803 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 CAMKK1Q8N5S9 505 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 TMEM174Q8WUU8 243 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 GAB3Q8WWW8 586 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 ACDQ96AP0 544 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 TNIP3Q96KP6 325 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 MED10Q9BTT4 135 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 LINC00597Q9H2U6 94 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 KCTD10Q9H3F6 313 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 SEMA4GQ9NTN9 838 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 TMEM30AQ9NV96 361 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 DMAC2Q9NW81 257 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 SMPD4Q9NXE4 827 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 CPQQ9Y646 472 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.9■□□□□ 0.78
PNKP-213ENST00000599543 MYOFQ9NZM1 2061 aa19.9■□□□□ 0.78
PNKP-213ENST00000599543 RTN3O95197 1032 aaPredicted RBP19.89■□□□□ 0.77
PNKP-213ENST00000599543 OLFM2O95897 454 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 C4BPAP04003 597 aaKnown RBP19.89■□□□□ 0.77
PNKP-213ENST00000599543 YWHAQP27348 245 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 ATXN1P54253 815 aaKnown RBP19.89■□□□□ 0.77
PNKP-213ENST00000599543 CDH8P55286 799 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 CSRP2Q16527 193 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 FILIP1Q7Z7B0 1213 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 NUP93Q8N1F7 819 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 PDZD8Q8NEN9 1154 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 CCDC26Q8TAB7 109 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 HHIPQ96QV1 700 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 RTKNQ9BST9 563 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 RNF38Q9H0F5 515 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 MAPK8IP1Q9UQF2 711 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 FRMD4BQ9Y2L6 1034 aa19.89■□□□□ 0.77
PNKP-213ENST00000599543 SLC9A3R1O14745 358 aaPredicted RBP19.88■□□□□ 0.77
PNKP-213ENST00000599543 KIF20AO95235 890 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 VNN1O95497 513 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 OAS1P00973 400 aaKnown RBP19.88■□□□□ 0.77
PNKP-213ENST00000599543 UBE2HP62256 183 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 DLG4P78352 724 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 CEP135Q66GS9 1140 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 PRR23CQ6ZRP0 262 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 SYT13Q7L8C5 426 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 CACNA2D4Q7Z3S7 1137 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 FAM35AQ86V20 835 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 DDX42Q86XP3 938 aaKnown RBP eCLIP19.88■□□□□ 0.77
PNKP-213ENST00000599543 KIAA1958Q8N8K9 716 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 NETO1Q8TDF5 533 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 OVCA2Q8WZ82 227 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 FBXO32Q969P5 355 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 CCDC47Q96A33 483 aaKnown RBP19.88■□□□□ 0.77
PNKP-213ENST00000599543 ELMO3Q96BJ8 720 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 SMARCD1Q96GM5 515 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 KCNK16Q96T55 309 aa19.88■□□□□ 0.77
PNKP-213ENST00000599543 DMAP1Q9NPF5 467 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms