RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 HCN4Q9Y3Q4 1203 aa24.13■■□□□ 1.45
IRF3-220ENST00000598108 MTF2Q9Y483 593 aaPredicted RBP24.13■■□□□ 1.45
IRF3-220ENST00000598108 FAM92AA1XBS5 289 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 RNF225M0QZC1 329 aaPredicted RBP24.12■■□□□ 1.45
IRF3-220ENST00000598108 USP17L7P0C7H9 530 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 MTIF2P46199 727 aaKnown RBP24.12■■□□□ 1.45
IRF3-220ENST00000598108 PPP3CCP48454 512 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 ZXDBP98169 803 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 PRKCQQ04759 706 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 ZNF268Q14587 947 aaPredicted RBP24.12■■□□□ 1.45
IRF3-220ENST00000598108 CT47A1Q5JQC4 288 aaPredicted RBP24.12■■□□□ 1.45
IRF3-220ENST00000598108 ARHGAP17Q68EM7 881 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 SHDQ96IW2 340 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 KREMEN1Q96MU8 473 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 SLITRK1Q96PX8 696 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 DNAI2Q9GZS0 605 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 SAMSN1Q9NSI8 373 aaKnown RBP24.12■■□□□ 1.45
IRF3-220ENST00000598108 GMIPQ9P107 970 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 ZNF318Q5VUA4 2279 aa24.12■■□□□ 1.45
IRF3-220ENST00000598108 COL4A3Q01955 1670 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 WDFY4Q6ZS81 3184 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 CKMP06732 381 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 YWHAEP62258 255 aaKnown RBP24.11■■□□□ 1.45
IRF3-220ENST00000598108 CCDC183Q5T5S1 534 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 TMEM270Q6UE05 265 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 TPRG1Q6ZUI0 275 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 GKN1Q9NS71 199 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 COMMD8Q9NX08 183 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 TMEM63CQ9P1W3 806 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 PCDHB4Q9Y5E5 795 aa24.11■■□□□ 1.45
IRF3-220ENST00000598108 OAS1P00973 400 aaKnown RBP24.1■■□□□ 1.45
IRF3-220ENST00000598108 CALCAP01258 141 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 SLC9A1P19634 815 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 RFX1P22670 979 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 APBA1Q02410 837 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 TNK2Q07912 1038 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 ARHGAP29Q52LW3 1261 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 TTC8Q8TAM2 541 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 OVCA2Q8WZ82 227 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 TFAP2BQ92481 460 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 FAM83CQ9BQN1 747 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 KIF9Q9HAQ2 790 aa24.1■■□□□ 1.45
IRF3-220ENST00000598108 KANSL1LA0AUZ9 987 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 OLFM2O95897 454 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 DCNP07585 359 aaKnown RBP24.09■■□□□ 1.45
IRF3-220ENST00000598108 ZDHHC11BP0C7U3 371 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 CD19P15391 556 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 GCNT1Q02742 428 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 ZNF77Q15935 545 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 SNX30Q5VWJ9 437 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 GJB7Q6PEY0 223 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 C11orf57Q6ZUT1 292 aaPredicted RBP24.09■■□□□ 1.45
IRF3-220ENST00000598108 TTC30AQ86WT1 665 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 ANKRD52Q8NB46 1076 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 TTC16Q8NEE8 873 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 PRSS33Q8NF86 280 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 ENOX1Q8TC92 643 aaKnown RBP24.09■■□□□ 1.45
IRF3-220ENST00000598108 SH3RF2Q8TEC5 729 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 ZSWIM1Q9BR11 485 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 UBE2TQ9NPD8 197 aaPredicted RBP24.09■■□□□ 1.45
IRF3-220ENST00000598108 THG1LQ9NWX6 298 aaKnown RBP24.09■■□□□ 1.45
IRF3-220ENST00000598108 GTSE1Q9NYZ3 720 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 ARHGAP26Q9UNA1 814 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 SIT1Q9Y3P8 196 aa24.09■■□□□ 1.45
IRF3-220ENST00000598108 GREB1Q4ZG55 1949 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 GLULP15104 373 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 PFKLP17858 780 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 SOX9P48436 509 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 KIF11P52732 1056 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 SLC7A9P82251 487 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 MAN2A1Q16706 1144 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 GOLGA7BQ2TAP0 167 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 MIIPQ5JXC2 388 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 TRIM68Q6AZZ1 485 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 TRIM65Q6PJ69 517 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 SASS6Q6UVJ0 657 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 FAM114A1Q8IWE2 563 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 PDZD8Q8NEN9 1154 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 PJA1Q8NG27 643 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 TUBGCP2Q9BSJ2 902 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 FBXO44Q9H4M3 255 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 PNPLA8Q9NP80 782 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 SCML2Q9UQR0 700 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 NFE2L3Q9Y4A8 694 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 PIAS3Q9Y6X2 628 aa24.08■■□□□ 1.45
IRF3-220ENST00000598108 FAM170BA6NMN3 283 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 TULP2O00295 520 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 CYP26A1O43174 497 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 COCHO43405 550 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 VDRP11473 427 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 PLCB2Q00722 1185 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 USP4Q13107 963 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 UBXN2BQ14CS0 331 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 SGO2Q562F6 1265 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 ZNF852Q6ZMS4 543 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 GBP6Q6ZN66 633 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 ZNF687Q8N1G0 1237 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 CSGALNACT1Q8TDX6 532 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 CCSER2Q9H7U1 834 aa24.07■■□□□ 1.44
IRF3-220ENST00000598108 LTB4R2Q9NPC1 389 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms