RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 PRR5-ARHGAP8B1AHC4 643 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 LEFTY2O00292 366 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 PHACTR2O75167 634 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 PRR29P0C7W0 189 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 CDH8P55286 799 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 DLG4P78352 724 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 CLDN10P78369 228 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 ARHGAP8P85298 464 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 BIRC3Q13489 604 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 ZNF699Q32M78 642 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 KMT5BQ4FZB7 885 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 CEP68Q76N32 757 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 B3GALNT2Q8NCR0 500 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 ENGASEQ8NFI3 743 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 GOLGA5Q8TBA6 731 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 PARD3BQ8TEW8 1205 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 CD101Q93033 1021 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 SYAP1Q96A49 352 aaPredicted RBP16.13■□□□□ 0.17
TGFB1-202ENST00000597453 ELOVL4Q9GZR5 314 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 RNF38Q9H0F5 515 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 SDCBP2Q9H190 292 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 KCTD10Q9H3F6 313 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 VRTNQ9H8Y1 702 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 DMAC2Q9NW81 257 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 SLC8A2Q9UPR5 921 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 MYH10P35580 1976 aa16.13■□□□□ 0.17
TGFB1-202ENST00000597453 ATG13O75143 517 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 VNN1O95497 513 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 OLFM2O95897 454 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 C4BPAP04003 597 aaKnown RBP16.12■□□□□ 0.17
TGFB1-202ENST00000597453 PFKLP17858 780 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 DPYDQ12882 1025 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 IFRD2Q12894 506 aaPredicted RBP16.12■□□□□ 0.17
TGFB1-202ENST00000597453 TAF10Q12962 218 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 PSMD2Q13200 908 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 SCARA5Q6ZMJ2 495 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 RPLP0P6Q8NHW5 317 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 IPO9Q96P70 1041 aaKnown RBP16.12■□□□□ 0.17
TGFB1-202ENST00000597453 SEMA4GQ9NTN9 838 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 EHD2Q9NZN4 543 aa16.12■□□□□ 0.17
TGFB1-202ENST00000597453 CDV3Q9UKY7 258 aaKnown RBP16.12■□□□□ 0.17
TGFB1-202ENST00000597453 SCAMP3O14828 347 aaKnown RBP16.11■□□□□ 0.17
TGFB1-202ENST00000597453 LRP3O75074 770 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 ABL1P00519 1130 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 OAS1P00973 400 aaKnown RBP16.11■□□□□ 0.17
TGFB1-202ENST00000597453 RPN1P04843 607 aaKnown RBP16.11■□□□□ 0.17
TGFB1-202ENST00000597453 SDHBP21912 280 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 PDE6CP51160 858 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 SLC7A9P82251 487 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 NCOA4Q13772 614 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 GAB4Q2WGN9 574 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 PAQR9Q6ZVX9 377 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 FILIP1Q7Z7B0 1213 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 FAM35AQ86V20 835 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 SLC9A9Q8IVB4 645 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 TMEM174Q8WUU8 243 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 GAB3Q8WWW8 586 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 CCDC47Q96A33 483 aaKnown RBP16.11■□□□□ 0.17
TGFB1-202ENST00000597453 TIGD1Q96MW7 591 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 HHIPQ96QV1 700 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 KCNK16Q96T55 309 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 SMPD4Q9NXE4 827 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 CPQQ9Y646 472 aa16.11■□□□□ 0.17
TGFB1-202ENST00000597453 CCDC163A0A0D9SF12 145 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 DCDC2BA2VCK2 349 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 ANTXRLA6NF34 631 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 RPP40O75818 363 aaKnown RBP16.1■□□□□ 0.17
TGFB1-202ENST00000597453 RHOBTB3O94955 611 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 CLSTN1O94985 981 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 NFATC1O95644 943 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 NR3C1P04150 777 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 OPRD1P41143 372 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 PPP3CCP48454 512 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 AP3M2P53677 418 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 CSRP2Q16527 193 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 FBXO43Q4G163 708 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 ZNF667Q5HYK9 610 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 PRR23CQ6ZRP0 262 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 KBTBD6Q86V97 674 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 EXOC4Q96A65 974 aa16.1■□□□□ 0.17
TGFB1-202ENST00000597453 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.09■□□□□ 0.17
TGFB1-202ENST00000597453 PDXKO00764 312 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 AXIN1O15169 862 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 GDF9O60383 454 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 CYP17A1P05093 508 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 YWHAQP27348 245 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 NR1H3Q13133 447 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 ORC1Q13415 861 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 ZACNQ401N2 412 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 C1orf220Q5T0J3 134 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 SYT13Q7L8C5 426 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 NUP93Q8N1F7 819 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 CAMKK1Q8N5S9 505 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 SCAMP5Q8TAC9 235 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 SLITRK1Q96PX8 696 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 MED10Q9BTT4 135 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 CFAP97Q9P2B7 532 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 HMGXB4Q9UGU5 601 aa16.09■□□□□ 0.17
TGFB1-202ENST00000597453 CNOT1A5YKK6 2376 aaKnown RBP16.09■□□□□ 0.17
TGFB1-202ENST00000597453 K7EQS6 105 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms