RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 TNNT1P13805 278 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 RGS19P49795 217 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 NDUFV1P49821 464 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 ERVK-21P61565 698 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 ETF1P62495 437 aaKnown RBP15.43■□□□□ 0.06
VRK3-212ENST00000596814 TAP1Q03518 808 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 ADCY1Q08828 1119 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 OLFML1Q6UWY5 402 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 GPRIN1Q7Z2K8 1008 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 TDHQ8IZJ6 230 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 SLC35F6Q8N357 371 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 TTC9BQ8N6N2 239 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 SPPL3Q8TCT6 385 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 TCF25Q9BQ70 676 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 RXFP1Q9HBX9 757 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 TLR9Q9NR96 1032 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 METTL5Q9NRN9 209 aaKnown RBP15.43■□□□□ 0.06
VRK3-212ENST00000596814 AFF4Q9UHB7 1163 aaKnown RBP15.43■□□□□ 0.06
VRK3-212ENST00000596814 ANAPC7Q9UJX3 599 aa15.43■□□□□ 0.06
VRK3-212ENST00000596814 LAMA2P24043 3122 aaKnown RBP15.43■□□□□ 0.06
VRK3-212ENST00000596814 PDE4DIPQ5VU43 2346 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 GRID2IPA4D2P6 1211 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 PALMO75781 387 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 TUBB4AP04350 444 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 TKTL1P51854 596 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 RAB33AQ14088 237 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 MGAT5BQ3V5L5 792 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 RAB41Q5JT25 222 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 PPP1R15BQ5SWA1 713 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 TPGS2Q68CL5 300 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 DCUN1D2Q6PH85 259 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 SCUBE3Q8IX30 993 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 FEZF2Q8TBJ5 459 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 C8orf48Q96LL4 319 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 MCEEQ96PE7 176 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 SEPT5Q99719 369 aaPredicted RBP15.42■□□□□ 0.06
VRK3-212ENST00000596814 NKX2-4Q9H2Z4 354 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 CRISPLD1Q9H336 500 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 MYO16Q9Y6X6 1858 aa15.42■□□□□ 0.06
VRK3-212ENST00000596814 SIGLEC16A6NMB1 481 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 TEX28O15482 410 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 BUB1BO60566 1050 aaPredicted RBP15.41■□□□□ 0.06
VRK3-212ENST00000596814 CSPG5O95196 566 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 CXCL14O95715 111 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 HAPLN1P10915 354 aaPredicted RBP15.41■□□□□ 0.06
VRK3-212ENST00000596814 KRT3P12035 628 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 ERVFC1P60507 584 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 SLC6A3Q01959 620 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 DUSP4Q13115 394 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 SMC1AQ14683 1233 aaKnown RBP15.41■□□□□ 0.06
VRK3-212ENST00000596814 PLPP4Q5VZY2 271 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 PPP2R2DQ66LE6 453 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 SYT10Q6XYQ8 523 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 ZNF461Q8TAF7 563 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 PIWIL1Q96J94 861 aaKnown RBP15.41■□□□□ 0.06
VRK3-212ENST00000596814 BTBD6Q96KE9 485 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 WDR24Q96S15 920 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 CNGB3Q9NQW8 809 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 DNAI1Q9UI46 699 aa15.41■□□□□ 0.06
VRK3-212ENST00000596814 ABLIM3O94929 683 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 FBXO21O94952 628 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 CNPP09543 421 aaKnown RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 DNAJB1P25685 340 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 SCNN1AP37088 669 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 GPR15P49685 360 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 SLC5A3P53794 718 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 RPL7AP62424 266 aaKnown RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 DDR2Q16832 855 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 C11orf63Q6NUN7 778 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 DAAM2Q86T65 1068 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 SYCE1Q8N0S2 351 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 LRRC57Q8N9N7 239 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 CLEC4CQ8WTT0 213 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 EMILIN2Q9BXX0 1053 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 ULBP1Q9BZM6 244 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 TRIM7Q9C029 511 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 SLC27A5Q9Y2P5 690 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 IRAK3Q9Y616 596 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 TNRC18O15417 2968 aaPredicted RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 RANBP2P49792 3224 aaKnown RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 TMEM191CA6NGB0 347 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 TMEM110-MUSTN1A8MSY1 372 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 MYO1FO00160 1098 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 GRM6O15303 877 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 SOAT2O75908 522 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 ADH1AP07327 375 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 ATF2P15336 505 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 RPL10AP62906 217 aaKnown RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 MRPS5P82675 430 aaKnown RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 GPM6BQ13491 265 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 MESDQ14696 234 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 DNTTIP2Q5QJE6 756 aaKnown RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 SLC26A9Q7LBE3 791 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 NGRNQ9NPE2 291 aaKnown RBP15.4■□□□□ 0.06
VRK3-212ENST00000596814 HSFX1Q9UBD0 423 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 LCMT1Q9UIC8 334 aa15.4■□□□□ 0.06
VRK3-212ENST00000596814 PLXNA3P51805 1871 aa15.39■□□□□ 0.05
VRK3-212ENST00000596814 C2orf71A6NGG8 1288 aa15.39■□□□□ 0.05
VRK3-212ENST00000596814 H3BNC9 293 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms