RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 SCAMP5Q8TAC9 235 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 OVCA2Q8WZ82 227 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 HEXIM2Q96MH2 286 aaKnown RBP22.33■■□□□ 1.17
PNKP-209ENST00000596726 NT5C1BQ96P26 610 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 SLITRK1Q96PX8 696 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 CYP2S1Q96SQ9 504 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 TRPC7Q9HCX4 862 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 DACH1Q9UI36 760 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 KANSL1LA0AUZ9 987 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 STK25O00506 426 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 USP17L7P0C7H9 530 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 MLLT6P55198 1093 aaPredicted RBP22.32■■□□□ 1.16
PNKP-209ENST00000596726 YWHAEP62258 255 aaKnown RBP22.32■■□□□ 1.16
PNKP-209ENST00000596726 ARHGAP17Q68EM7 881 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 ARL14EPQ8N8R7 260 aaPredicted RBP22.32■■□□□ 1.16
PNKP-209ENST00000596726 RIN3Q8TB24 985 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 PRRX2Q99811 253 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 FOXQ1Q9C009 403 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 THAP9Q9H5L6 903 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 PNPLA8Q9NP80 782 aa22.32■■□□□ 1.16
PNKP-209ENST00000596726 MYO16Q9Y6X6 1858 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 OLFM2O95897 454 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 TCF3P15923 654 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 HDCP19113 662 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 ACO1P21399 889 aaKnown RBP22.31■■□□□ 1.16
PNKP-209ENST00000596726 PDE6CP51160 858 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 IFRD2Q12894 506 aaPredicted RBP22.31■■□□□ 1.16
PNKP-209ENST00000596726 SNX30Q5VWJ9 437 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 TPRG1Q6ZUI0 275 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 PDZD8Q8NEN9 1154 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 PRSS33Q8NF86 280 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 PJA1Q8NG27 643 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 FBXO32Q969P5 355 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 ZFYVE19Q96K21 471 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 DUSP16Q9BY84 665 aa22.31■■□□□ 1.16
PNKP-209ENST00000596726 MBD3O95983 291 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 OAS1P00973 400 aaKnown RBP22.3■■□□□ 1.16
PNKP-209ENST00000596726 CKMP06732 381 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 ZDHHC11BP0C7U3 371 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 GLULP15104 373 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 RFX1P22670 979 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 PLCB2Q00722 1185 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 TPD52L1Q16890 204 aaPredicted RBP22.3■■□□□ 1.16
PNKP-209ENST00000596726 KAT5Q92993 513 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 FAM83CQ9BQN1 747 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 OSBPL6Q9BZF3 934 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 RNF38Q9H0F5 515 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 THG1LQ9NWX6 298 aaKnown RBP22.3■■□□□ 1.16
PNKP-209ENST00000596726 DLGAP2Q9P1A6 1054 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 ARHGAP26Q9UNA1 814 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 SIT1Q9Y3P8 196 aa22.3■■□□□ 1.16
PNKP-209ENST00000596726 CD72P21854 359 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 SLC7A9P82251 487 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 GCNT1Q02742 428 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 USP4Q13107 963 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 ZNF77Q15935 545 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 GPRIN1Q7Z2K8 1008 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 ARHGEF19Q8IW93 802 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 PPM1KQ8N3J5 372 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 CSGALNACT1Q8TDX6 532 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 NELL2Q99435 816 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 INTS2Q9H0H0 1204 aaKnown RBP22.29■■□□□ 1.16
PNKP-209ENST00000596726 FBXO44Q9H4M3 255 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 LTB4R2Q9NPC1 389 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 GKN1Q9NS71 199 aa22.29■■□□□ 1.16
PNKP-209ENST00000596726 CHORDC1Q9UHD1 332 aaPredicted RBP22.29■■□□□ 1.16
PNKP-209ENST00000596726 MTF2Q9Y483 593 aaPredicted RBP22.29■■□□□ 1.16
PNKP-209ENST00000596726 MAN2B1O00754 1011 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 GALR2O43603 387 aaPredicted RBP22.28■■□□□ 1.16
PNKP-209ENST00000596726 ZXDBP98169 803 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 ZNF852Q6ZMS4 543 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 RRAGAQ7L523 313 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 CREBRFQ8IUR6 639 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 CCDC105Q8IYK2 499 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 ZNF687Q8N1G0 1237 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 MSANTD3Q96H12 275 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 UBXN6Q9BZV1 441 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 GMIPQ9P107 970 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 KIAA1257Q9ULG3 409 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 PIAS3Q9Y6X2 628 aa22.28■■□□□ 1.16
PNKP-209ENST00000596726 FAM170BA6NMN3 283 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 ABL1P00519 1130 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 DCNP07585 359 aaKnown RBP22.27■■□□□ 1.16
PNKP-209ENST00000596726 VDRP11473 427 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 MTIF2P46199 727 aaKnown RBP22.27■■□□□ 1.16
PNKP-209ENST00000596726 KIF11P52732 1056 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 TCF15Q12870 199 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 MTF1Q14872 753 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 FAM114A1Q8IWE2 563 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 ANKRD52Q8NB46 1076 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 KREMEN1Q96MU8 473 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 C8orf33Q9H7E9 229 aaPredicted RBP22.27■■□□□ 1.16
PNKP-209ENST00000596726 GTSE1Q9NYZ3 720 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 SCML2Q9UQR0 700 aa22.27■■□□□ 1.16
PNKP-209ENST00000596726 GTPBP10A4D1E9 387 aaKnown RBP22.26■■□□□ 1.15
PNKP-209ENST00000596726 RNF225M0QZC1 329 aaPredicted RBP22.26■■□□□ 1.15
PNKP-209ENST00000596726 PAEPP09466 180 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 TARSP26639 723 aaKnown RBP22.26■■□□□ 1.15
PNKP-209ENST00000596726 PGFP49763 221 aa22.26■■□□□ 1.15
PNKP-209ENST00000596726 TUBP50607 506 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms