RNA–Protein interactions for RNA: ENST00000596351.5

LTBP4-215, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-215ENST00000596351 CPQQ9Y646 472 aa12.87□□□□□ -0.35
LTBP4-215ENST00000596351 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.86□□□□□ -0.35
LTBP4-215ENST00000596351 PRR5-ARHGAP8B1AHC4 643 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 GDF9O60383 454 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 ATG13O75143 517 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
LTBP4-215ENST00000596351 VNN1O95497 513 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
LTBP4-215ENST00000596351 SLFN14P0C7P3 912 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 SEC13P55735 322 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 ARHGAP8P85298 464 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 AMPD2Q01433 879 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 TAF10Q12962 218 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 ORC1Q13415 861 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 GAB4Q2WGN9 574 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 FILIP1Q7Z7B0 1213 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 KBTBD6Q86V97 674 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 PARD3BQ8TEW8 1205 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 GAB3Q8WWW8 586 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 KCNK16Q96T55 309 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 ELOVL4Q9GZR5 314 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 CGNQ9P2M7 1197 aaKnown RBP12.86□□□□□ -0.35
LTBP4-215ENST00000596351 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
LTBP4-215ENST00000596351 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
LTBP4-215ENST00000596351 CEP295Q9C0D2 2601 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 AXIN1O15169 862 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 LRP3O75074 770 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 NFATC1O95644 943 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 OAS1P00973 400 aaKnown RBP12.85□□□□□ -0.35
LTBP4-215ENST00000596351 CYP17A1P05093 508 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 CCDC192P0DO97 292 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 TCF3P15923 654 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 ATICP31939 592 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 OPRD1P41143 372 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 PDE6CP51160 858 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 NCOA4Q13772 614 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 SF3A2Q15428 464 aaKnown RBP12.85□□□□□ -0.35
LTBP4-215ENST00000596351 CSRP2Q16527 193 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 ZNF667Q5HYK9 610 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 ATL3Q6DD88 541 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 FAM35AQ86V20 835 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 SFTPA1Q8IWL2 248 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 GOLGA5Q8TBA6 731 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 CEP295NLQ96MC4 621 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 MED10Q9BTT4 135 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 ARRDC1-AS1Q9H2J1 176 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 KCTD10Q9H3F6 313 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.351e-6■■■■■ 57.6
LTBP4-215ENST00000596351 DMAC2Q9NW81 257 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 CFAP97Q9P2B7 532 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 HMGXB4Q9UGU5 601 aa12.85□□□□□ -0.35
LTBP4-215ENST00000596351 CACNA1BQ00975 2339 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 OLFM2O95897 454 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 C4BPAP04003 597 aaKnown RBP12.84□□□□□ -0.35
LTBP4-215ENST00000596351 NR3C1P04150 777 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 FAM163BP0C2L3 166 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 MBL2P11226 248 aaPredicted RBP12.84□□□□□ -0.35
LTBP4-215ENST00000596351 PDIA4P13667 645 aaKnown RBP12.84□□□□□ -0.35
LTBP4-215ENST00000596351 SDHBP21912 280 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 CLDN10P78369 228 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 SLC7A9P82251 487 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 MESP2Q0VG99 397 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 NR1H3Q13133 447 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 DMC1Q14565 340 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 FBXO43Q4G163 708 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 CEP135Q66GS9 1140 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 SPOPLQ6IQ16 392 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 PAQR9Q6ZVX9 377 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 ACOT1Q86TX2 421 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 SCAMP5Q8TAC9 235 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 FBXO32Q969P5 355 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 SLITRK1Q96PX8 696 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 RTKNQ9BST9 563 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 SMOC1Q9H4F8 434 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 EHD2Q9NZN4 543 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 ZDHHC9Q9Y397 364 aa12.84□□□□□ -0.35
LTBP4-215ENST00000596351 GON4LQ3T8J9 2241 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 CCDC163A0A0D9SF12 145 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 DCLK1O15075 740 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
LTBP4-215ENST00000596351 CCDC130P13994 396 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 PFKLP17858 780 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 CMA1P23946 247 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 YWHAQP27348 245 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 SLC6A11P48066 632 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 SLC5A3P53794 718 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 C2orf27AQ580R0 203 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 C1orf220Q5T0J3 134 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 SYT13Q7L8C5 426 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 CACNA2D4Q7Z3S7 1137 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 C12orf40Q86WS4 652 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 SLC9A9Q8IVB4 645 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 FUKQ8N0W3 1084 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 NUP93Q8N1F7 819 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 NETO1Q8TDF5 533 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 EXOC4Q96A65 974 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 ACDQ96AP0 544 aa12.83□□□□□ -0.36
LTBP4-215ENST00000596351 SPATA32Q96LK8 384 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms