RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 PLIN2Q99541 437 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 MMTAG2Q9BU76 263 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 RNF38Q9H0F5 515 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 SMPD4Q9NXE4 827 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 TOR4AQ9NXH8 423 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 DKK4Q9UBT3 224 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 HCN2Q9UL51 889 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 CYP8B1Q9UNU6 501 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 GOLGA4Q13439 2230 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 PTPRBP23467 1997 aa14.74□□□□□ -0.05
SHKBP1-208ENST00000595726 MYO18BQ8IUG5 2567 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 CEP192Q8TEP8 1941 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 A0A0A0MRY4 1105 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 TULP1O00294 542 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 LAD1O00515 517 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 HNRNPDLO14979 420 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 ITPKBP27987 946 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 GRIA2P42262 883 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 TNFRSF4P43489 277 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 GRIK2Q13002 908 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 RESTQ13127 1097 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 KYAT1Q16773 422 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 HSF5Q4G112 596 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 SLC39A4Q6P5W5 647 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 GLRX5Q86SX6 157 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 MIB1Q86YT6 1006 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 CD302Q8IX05 232 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 PDCL2Q8N4E4 241 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 NAT16Q8N8M0 369 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 FSIP1Q8NA03 581 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 PKMYT1Q99640 499 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 CCSER1Q9C0I3 900 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 SLC6A17Q9H1V8 727 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 PRDM16Q9HAZ2 1276 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 DDX43Q9NXZ2 648 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 KIAA1522Q9P206 1035 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 SHROOM3Q8TF72 1996 aa14.73□□□□□ -0.05
SHKBP1-208ENST00000595726 PLXND1Q9Y4D7 1925 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 MYO18AQ92614 2054 aaKnown RBP14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 TBC1D3BA6NDS4 549 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 TISP43B9A030 160 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 TRIM24O15164 1050 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 PRPHP41219 470 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 NCKAP1LP55160 1127 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 USP46P62068 366 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 CAMK2BQ13554 666 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 KRT79Q5XKE5 535 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 ZNF605Q86T29 641 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 SCUBE3Q8IX30 993 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 PHTF2Q8N3S3 785 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 TIPINQ9BVW5 301 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 L1RE1Q9UN81 338 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 DERAQ9Y315 318 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 CPQQ9Y646 472 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 MYOFQ9NZM1 2061 aa14.72□□□□□ -0.05
SHKBP1-208ENST00000595726 ANAPC1Q9H1A4 1944 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 A0A1W2PQF6 199 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ANKRD63C9JTQ0 380 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ADH5P11766 374 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 HOXB2P14652 356 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 SV2CQ496J9 727 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ARSHQ5FYA8 562 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 INTS6LQ5JSJ4 861 aaKnown RBP14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 LY6G5CQ5SRR4 150 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 OSTM1Q86WC4 334 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 SPATA2LQ8IUW3 424 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ZNF843Q8N446 348 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ZNF513Q8N8E2 541 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 LEO1Q8WVC0 666 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ZNF419Q96HQ0 510 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 FAM84AQ96KN4 292 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ACOX2Q99424 681 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ACBD6Q9BR61 282 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 RAB34Q9BZG1 259 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 IKZF4Q9H2S9 585 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 FAM124BQ9H5Z6 455 aaPredicted RBP14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 ABCB6Q9NP58 842 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 CFAP97Q9P2B7 532 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 KCNG1Q9UIX4 513 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 RAI2Q9Y5P3 530 aa14.71□□□□□ -0.05
SHKBP1-208ENST00000595726 COL12A1Q99715 3063 aa14.71□□□□□ -0.06
SHKBP1-208ENST00000595726 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 ATP2C2O75185 946 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 ABL1P00519 1130 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 PIGRP01833 764 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 NDUFV2P19404 249 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 EIF2DP41214 584 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 ABCG1P45844 678 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 SLC12A3P55017 1021 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 DTHD1Q6ZMT9 781 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 SYT2Q8N9I0 419 aaPredicted RBP14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 INTS4Q96HW7 963 aaKnown RBP14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 ASB7Q9H672 318 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 TRPM5Q9NZQ8 1165 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 C2CD2Q9Y426 696 aa14.7□□□□□ -0.06
SHKBP1-208ENST00000595726 VPS37CA5D8V6 355 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 TK2O00142 265 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 ATXN7O15265 892 aaPredicted RBP14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 NDUFS2O75306 463 aa14.69□□□□□ -0.06
SHKBP1-208ENST00000595726 ADH1CP00326 375 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms