RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 DNAI2Q9GZS0 605 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 TRPC7Q9HCX4 862 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 CNTN6Q9UQ52 1028 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 FHOD1Q9Y613 1164 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 SMTNL1A8MU46 457 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 LGALS16A8MUM7 142 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 RTN3O95197 1032 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 ABL1P00519 1130 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 PAEPP09466 180 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 PGFP49763 221 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 MFAP3P55082 362 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 PDE4CQ08493 712 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 KLHDC7AQ5VTJ3 777 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 VITQ6UXI7 678 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 ARID3BQ8IVW6 561 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 EDAQ92838 391 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 FBXO32Q969P5 355 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 LRRC3BQ96PB8 259 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 CYP2S1Q96SQ9 504 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 GPR88Q9GZN0 384 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 ZFP14Q9HCL3 533 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 C11orf16Q9NQ32 467 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 IL37Q9NZH6 218 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 GMIPQ9P107 970 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 CHORDC1Q9UHD1 332 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 DUSP12Q9UNI6 340 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 CCL26Q9Y258 94 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 MUC3AQ02505 3323 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 KMT2EQ8IZD2 1858 aa14.57□□□□□ -0.08
SHKBP1-207ENST00000595631 MIA3Q5JRA6 1907 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 CUL9Q8IWT3 2517 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 HEPACAM2A8MVW5 462 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 EPHB6O15197 1021 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 CYP26A1O43174 497 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ECI2O75521 394 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 TPM2P07951 284 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 CFHP08603 1231 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ALADP13716 330 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 FKBP15Q5T1M5 1219 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 IER5LQ5T953 404 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ENOSF1Q7L5Y1 443 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 PIGZQ86VD9 579 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 MON1AQ86VX9 555 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 CMTM8Q8IZV2 173 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ARL14EPQ8N8R7 260 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ANKRD52Q8NB46 1076 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ANKRD20A12PQ8NF67 263 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 SHC3Q92529 594 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 NXPE3Q969Y0 559 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ELSPBP1Q96BH3 223 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 SLITRK1Q96PX8 696 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 GANQ9H2C0 597 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 TRPM5Q9NZQ8 1165 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 SIK3Q9Y2K2 1263 aa14.56□□□□□ -0.08
SHKBP1-207ENST00000595631 ZNF840PA6NDX5 716 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 M0QYV0 167 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 FOXN3O00409 490 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 TEX33O43247 280 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 DDX6P26196 483 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 BCAT1P54687 386 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 GPC5P78333 572 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 UBXN1Q04323 297 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 RAPGEF1Q13905 1077 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 SYCP1Q15431 976 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 PKDCCQ504Y2 493 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 LCLAT1Q6UWP7 414 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 UBALD2Q8IYN6 164 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 RIN3Q8TB24 985 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 USP13Q92995 863 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 SECISBP2LQ93073 1101 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 NAA15Q9BXJ9 866 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 TRPV4Q9HBA0 871 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 FAM207AQ9NSI2 230 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 EHD2Q9NZN4 543 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 KIAA1257Q9ULG3 409 aa14.55□□□□□ -0.08
SHKBP1-207ENST00000595631 MYOFQ9NZM1 2061 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 TRAV19A0A0A6YYK7 116 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 FAM92AA1XBS5 289 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 PIK3R2O00459 728 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 XPO1O14980 1071 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 THAP12O43422 761 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 GABBR2O75899 941 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 PDGFBP01127 241 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 CKMP06732 381 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 SRFP11831 508 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 UCHL3P15374 230 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 GNA15P30679 374 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 AVPR1AP37288 418 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 RGS7P49802 495 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 KIF11P52732 1056 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 SIGLEC14Q08ET2 396 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 BST2Q10589 180 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 DRAP1Q14919 205 aaPredicted RBP14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 CNGA2Q16280 664 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 DENND1BQ6P3S1 775 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 TRIM67Q6ZTA4 783 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 TTC16Q8NEE8 873 aa14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 NDRG1Q92597 394 aaKnown RBP14.54□□□□□ -0.08
SHKBP1-207ENST00000595631 FAM81BQ96LP2 452 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms