RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 EHD2Q9NZN4 543 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 PCDHA3Q9Y5H8 950 aa15.96■□□□□ 0.14
VRK3-207ENST00000594092 PTPRDP23468 1912 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 CCDC66A2RUB6 948 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 HHLA1C9JL84 531 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 F8VP50 259 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 TBC1D4O60343 1298 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 GRAP2O75791 330 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 GJB5O95377 273 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 LAG3P18627 525 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 SCNN1AP37088 669 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 RNASE9P60153 205 aaKnown RBP15.95■□□□□ 0.14
VRK3-207ENST00000594092 ADIGQ0VDE8 80 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 PIGHQ14442 188 aaPredicted RBP15.95■□□□□ 0.14
VRK3-207ENST00000594092 TRNP1Q6NT89 227 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 SLC39A11Q8N1S5 342 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 COLGALT1Q8NBJ5 622 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 NOA1Q8NC60 698 aaKnown RBP15.95■□□□□ 0.14
VRK3-207ENST00000594092 SPATA4Q8NEY3 305 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 UBXN6Q9BZV1 441 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 SMARCAL1Q9NZC9 954 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 ZMYND8Q9ULU4 1186 aaPredicted RBP15.95■□□□□ 0.14
VRK3-207ENST00000594092 USTQ9Y2C2 406 aa15.95■□□□□ 0.14
VRK3-207ENST00000594092 C2CD4BA6NLJ0 364 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 CEP104O60308 925 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 PSMA2P25787 234 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 FLT3P36888 993 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 TAS2R40P59535 323 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 ADCY1Q08828 1119 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 C2orf54Q08AI8 447 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 NFE2Q16621 373 aaPredicted RBP15.94■□□□□ 0.14
VRK3-207ENST00000594092 USP41Q3LFD5 358 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 RAB41Q5JT25 222 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 ANKS3Q6ZW76 656 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 SLC26A9Q7LBE3 791 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 GPRIN1Q7Z2K8 1008 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 ACTRT1Q8TDG2 376 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 CARD9Q9H257 536 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 LRRC4Q9HBW1 653 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 DMAP1Q9NPF5 467 aaPredicted RBP15.94■□□□□ 0.14
VRK3-207ENST00000594092 H7C4K7 107 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 CYP2F1P24903 491 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 NDUFV1P49821 464 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 TKTL1P51854 596 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 HTRA4P83105 476 aaPredicted RBP15.94■□□□□ 0.14
VRK3-207ENST00000594092 CC2D1AQ6P1N0 951 aaPredicted RBP15.94■□□□□ 0.14
VRK3-207ENST00000594092 PRSS55Q6UWB4 352 aaPredicted RBP15.94■□□□□ 0.14
VRK3-207ENST00000594092 RSPO2Q6UXX9 243 aaPredicted RBP15.94■□□□□ 0.14
VRK3-207ENST00000594092 RXFP2Q8WXD0 754 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 HERVK_113Q902F9 699 aa15.94■□□□□ 0.14
VRK3-207ENST00000594092 ABI2Q9NYB9 513 aaPredicted RBP15.94■□□□□ 0.14
VRK3-207ENST00000594092 PGRMC1O00264 195 aaKnown RBP15.93■□□□□ 0.14
VRK3-207ENST00000594092 PDGFRAP16234 1089 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 GPD1P21695 349 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 ZNF143P52747 638 aaPredicted RBP15.93■□□□□ 0.14
VRK3-207ENST00000594092 MRPS5P82675 430 aaKnown RBP15.93■□□□□ 0.14
VRK3-207ENST00000594092 CCDC70Q6NSX1 233 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 SIX6OS1Q8N1H7 587 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 RASGEF1CQ8N431 466 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 MMGT1Q8N4V1 131 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 ARFGAP1Q8N6T3 406 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 NDRG1Q92597 394 aaKnown RBP15.93■□□□□ 0.14
VRK3-207ENST00000594092 TMEM169Q96HH4 297 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 FUBP3Q96I24 572 aaKnown RBP eCLIP15.93■□□□□ 0.14
VRK3-207ENST00000594092 CHST7Q9NS84 486 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 SPG21Q9NZD8 308 aa15.93■□□□□ 0.14
VRK3-207ENST00000594092 CARNS1A5YM72 827 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 PSTPIP1O43586 416 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 FBXO21O94952 628 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 RHOXF2BP0C7M4 288 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 TCF4P15884 667 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 RWDD2BP57060 319 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 ZNF211Q13398 564 aaPredicted RBP15.92■□□□□ 0.14
VRK3-207ENST00000594092 CLUL1Q15846 466 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 ARCQ7LC44 396 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 RHOT1Q8IXI2 618 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 RIN2Q8WYP3 895 aaPredicted RBP15.92■□□□□ 0.14
VRK3-207ENST00000594092 RHOXF2Q9BQY4 288 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 CNPY3Q9BT09 278 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 ZBED2Q9BTP6 218 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 OXCT2Q9BYC2 517 aaPredicted RBP15.92■□□□□ 0.14
VRK3-207ENST00000594092 ULBP1Q9BZM6 244 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 EPC1Q9H2F5 836 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 PNPLA8Q9NP80 782 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 ARGLU1Q9NWB6 273 aaPredicted RBP15.92■□□□□ 0.14
VRK3-207ENST00000594092 PCDHB5Q9Y5E4 795 aa15.92■□□□□ 0.14
VRK3-207ENST00000594092 DPYSL4O14531 572 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 LRCH4O75427 683 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 SOD2P04179 222 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 CPB1P15086 417 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 GRIK1P39086 918 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 SSR1P43307 286 aaKnown RBP15.91■□□□□ 0.14
VRK3-207ENST00000594092 ARPP19P56211 112 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 GPR17Q13304 367 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 ACAP1Q15027 740 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 CCDC14Q49A88 953 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 EFHC1Q5JVL4 640 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 PIK3R5Q8WYR1 880 aa15.91■□□□□ 0.14
VRK3-207ENST00000594092 RNPC3Q96LT9 517 aaKnown RBP15.91■□□□□ 0.14
VRK3-207ENST00000594092 PGLYRP2Q96PD5 576 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 198.1 ms