RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 ETNK1Q9HBU6 452 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 RPL10AP62906 217 aaKnown RBP18.88■□□□□ 0.61
SYNM-204ENST00000594047 ACVR2BQ13705 512 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.88■□□□□ 0.61
SYNM-204ENST00000594047 ZNF555Q8NEP9 628 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 EIF2AQ9BY44 585 aaKnown RBP18.88■□□□□ 0.61
SYNM-204ENST00000594047 OSBPL8Q9BZF1 889 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.88■□□□□ 0.61
SYNM-204ENST00000594047 ARHGEF40Q8TER5 1519 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 SUPT7LO94864 414 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 MTSS1LQ765P7 747 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 SLFN11Q7Z7L1 901 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 ADAM2Q99965 735 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 NT5C1B-RDH14C9J2C7 533 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 STRNO43815 780 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 EIF2S1P05198 315 aaKnown RBP18.88■□□□□ 0.61
SYNM-204ENST00000594047 MSH3P20585 1137 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 NPTX2P47972 431 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 KHDRBS2Q5VWX1 349 aaKnown RBP18.88■□□□□ 0.61
SYNM-204ENST00000594047 FAR2Q96K12 515 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 THUMPD3Q9BV44 507 aaKnown RBP18.88■□□□□ 0.61
SYNM-204ENST00000594047 PCDHGA4Q9Y5G9 962 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 CNTNAP4Q9C0A0 1308 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 VPS26AO75436 327 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 AP2B1P63010 937 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 CES5AQ6NT32 575 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 DDX42Q86XP3 938 aaKnown RBP eCLIP18.88■□□□□ 0.61
SYNM-204ENST00000594047 NCKAP1Q9Y2A7 1128 aa18.88■□□□□ 0.61
SYNM-204ENST00000594047 ZNF500O60304 480 aaPredicted RBP18.87■□□□□ 0.61
SYNM-204ENST00000594047 ITGA8P53708 1063 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 TRIM65Q6PJ69 517 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 LPPQ93052 612 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 CENPTQ96BT3 561 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 DEFB118Q96PH6 123 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 THAP2Q9H0W7 228 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 IFRD1O00458 451 aaPredicted RBP18.87■□□□□ 0.61
SYNM-204ENST00000594047 GMFGO60234 142 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 TPST1O60507 370 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 RBP3P10745 1247 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 CLK2P49760 499 aaKnown RBP18.87■□□□□ 0.61
SYNM-204ENST00000594047 SEMA4DQ92854 862 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 TULP4Q9NRJ4 1543 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 VGLL4Q14135 290 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 ERI2A8K979 691 aaKnown RBP18.87■□□□□ 0.61
SYNM-204ENST00000594047 KIAA0391O15091 583 aaKnown RBP18.87■□□□□ 0.61
SYNM-204ENST00000594047 PHF2O75151 1096 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 GRK3P35626 688 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 ADIGQ0VDE8 80 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 IKBKEQ14164 716 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 CHI3L2Q15782 390 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 EMBQ6PCB8 327 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 SH2D3CQ8N5H7 860 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 PIK3R5Q8WYR1 880 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 WNT10BO00744 389 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 ACTN3Q08043 901 aaPredicted RBP18.87■□□□□ 0.61
SYNM-204ENST00000594047 ZBTB17Q13105 803 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 LGI2Q8N0V4 545 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 SPG21Q9NZD8 308 aa18.87■□□□□ 0.61
SYNM-204ENST00000594047 CAMSAP1Q5T5Y3 1602 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 SRGNP10124 158 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 ANTXR2P58335 489 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 HIC1Q14526 733 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 TMED8Q6PL24 325 aaPredicted RBP18.86■□□□□ 0.61
SYNM-204ENST00000594047 SYTL1Q8IYJ3 562 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 PLA2G12BQ9BX93 195 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 MRPL1Q9BYD6 325 aaKnown RBP18.86■□□□□ 0.61
SYNM-204ENST00000594047 AASDHPPTQ9NRN7 309 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 AKR1A1P14550 325 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 BDNFP23560 247 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 POU1F1P28069 291 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 KCNK10P57789 538 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 ORC2Q13416 577 aaPredicted RBP18.86■□□□□ 0.61
SYNM-204ENST00000594047 PTK6Q13882 451 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 SETD3Q86TU7 594 aaPredicted RBP18.86■□□□□ 0.61
SYNM-204ENST00000594047 NAT16Q8N8M0 369 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 RIT2Q99578 217 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 TLL1O43897 1013 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 NFICP08651 508 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 OR1E1P30953 314 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 PLPP4Q5VZY2 271 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 C7orf25Q9BPX7 421 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 LZTS1Q9Y250 596 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 STIP1P31948 543 aaKnown RBP18.86■□□□□ 0.61
SYNM-204ENST00000594047 CTCFP49711 727 aaPredicted RBP18.86■□□□□ 0.61
SYNM-204ENST00000594047 RALGDSQ12967 914 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 CLPBQ9H078 707 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 AGPAT3Q9NRZ7 376 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 PCDHB2Q9Y5E7 798 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 GRAMD4Q6IC98 578 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 ARMC2Q8NEN0 867 aa18.86■□□□□ 0.61
SYNM-204ENST00000594047 AGO4Q9HCK5 861 aaKnown RBP18.86■□□□□ 0.61
SYNM-204ENST00000594047 CCNT2O60583 730 aaKnown RBP18.85■□□□□ 0.61
SYNM-204ENST00000594047 ATP6V1C1P21283 382 aa18.85■□□□□ 0.61
SYNM-204ENST00000594047 PSEN2P49810 448 aa18.85■□□□□ 0.61
SYNM-204ENST00000594047 HIRAP54198 1017 aaPredicted RBP18.85■□□□□ 0.61
SYNM-204ENST00000594047 LNPEPQ9UIQ6 1025 aa18.85■□□□□ 0.61
SYNM-204ENST00000594047 PCDHAC2Q9Y5I4 1007 aa18.85■□□□□ 0.61
SYNM-204ENST00000594047 OGTO15294 1046 aa18.85■□□□□ 0.61
SYNM-204ENST00000594047 PLA2G6O60733 806 aa18.85■□□□□ 0.61
SYNM-204ENST00000594047 ELNP15502 786 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms