RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 FMO5P49326 533 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 ZXDBP98169 803 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 ANGPT1Q15389 498 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 WDR44Q5JSH3 913 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 FAM3CQ92520 227 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 CYFIP2Q96F07 1278 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 MED15Q96RN5 788 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 RNF38Q9H0F5 515 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 CISHQ9NSE2 258 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 FAM86C1Q9NVL1 165 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 MRPS17Q9Y2R5 130 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 MIA3Q5JRA6 1907 aa19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 KIF26AQ9ULI4 1882 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-202ENST00000593764 FAM92AA1XBS5 289 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 CKMP06732 381 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 PFKLP17858 780 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 ADORA2BP29275 332 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 SLC5A3P53794 718 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 MAP3K7CLP57077 242 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 IFRD2Q12894 506 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 ZNF77Q15935 545 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 CCDC40Q4G0X9 1142 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 ZNF394Q53GI3 561 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 C1orf210Q8IVY1 113 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 TTC8Q8TAM2 541 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 ATOH1Q92858 354 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 SLITRK1Q96PX8 696 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 SRRTQ9BXP5 876 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 CLSTN2Q9H4D0 955 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 C8orf33Q9H7E9 229 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 HPS4Q9NQG7 708 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 LMBRD1Q9NUN5 540 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 CHORDC1Q9UHD1 332 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 NDRG2Q9UN36 371 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 ARHGAP26Q9UNA1 814 aa19.59■□□□□ 0.73
SHKBP1-202ENST00000593764 OTOL1A6NHN0 477 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 HHLA1C9JL84 531 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 OLFM2O95897 454 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 OAS1P00973 400 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 TCF3P15923 654 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 RPS9P46781 194 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 KPNA1P52294 538 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 RAD23BP54727 409 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 MARSP56192 900 aaKnown RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 USP4Q13107 963 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 PPP1R26Q5T8A7 1209 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 TRIM68Q6AZZ1 485 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 TXNDC11Q6PKC3 985 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 CLEC20AQ6ZU45 233 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 TRIM59Q8IWR1 403 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 MAML2Q8IZL2 1156 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 SLC4A11Q8NBS3 891 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 LMO3Q8TAP4 145 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 SH3RF2Q8TEC5 729 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 OVCA2Q8WZ82 227 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 FAM124BQ9H5Z6 455 aaPredicted RBP19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 COMMD8Q9NX08 183 aa19.58■□□□□ 0.72
SHKBP1-202ENST00000593764 SPECC1L-ADORA2AF8WAN1 911 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 NCAM2O15394 837 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 ABL1P00519 1130 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 FAM200BP0CF97 657 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 CTHP32929 405 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 PGFP49763 221 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 SLC7A9P82251 487 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 CUL2Q13617 745 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 MTF1Q14872 753 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 ITPRIPL2Q3MIP1 535 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 SNX30Q5VWJ9 437 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 GPRIN1Q7Z2K8 1008 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 RALGPS2Q86X27 583 aaPredicted RBP19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 TTC39CQ8N584 583 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 FBXO32Q969P5 355 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 CHFRQ96EP1 664 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 MSANTD3Q96H12 275 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 TMEM176AQ96HP8 235 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 HEXIM2Q96MH2 286 aaKnown RBP19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 EBF3Q9H4W6 596 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 RWDD2AQ9UIY3 292 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 MYH10P35580 1976 aa19.57■□□□□ 0.72
SHKBP1-202ENST00000593764 GNA14O95837 355 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 ZDHHC11BP0C7U3 371 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 CHRNB1P11230 501 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 ARSAP15289 507 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 TRIM21P19474 475 aaKnown RBP19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 MAGEA9P43362 315 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 PDE6CP51160 858 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 LRMPQ12912 555 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 RUNX3Q13761 415 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 UBR7Q8N806 425 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 PDZD8Q8NEN9 1154 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 DUSP16Q9BY84 665 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 LMAN1LQ9HAT1 526 aa19.56■□□□□ 0.72
SHKBP1-202ENST00000593764 P4HA2O15460 535 aa19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 KCNH2Q12809 1159 aa19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 CC2D1AQ6P1N0 951 aaPredicted RBP19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 C1orf228Q6PIY5 440 aa19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 ALYREFQ86V81 257 aaKnown RBP19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 MLKLQ8NB16 471 aa19.55■□□□□ 0.72
SHKBP1-202ENST00000593764 OSCP1Q8WVF1 389 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms