RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 MDGA1Q8NFP4 955 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 CCDC127Q96BQ5 260 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 DHX58Q96C10 678 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 CNOT6LQ96LI5 555 aaKnown RBP17.43■□□□□ 0.38
LIG1-205ENST00000593425 GZF1Q9H116 711 aaPredicted RBP17.43■□□□□ 0.38
LIG1-205ENST00000593425 SNX25Q9H3E2 840 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 ZSCAN16Q9H4T2 348 aaPredicted RBP17.43■□□□□ 0.38
LIG1-205ENST00000593425 MMP17Q9ULZ9 603 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 MYOFQ9NZM1 2061 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 EPG5Q9HCE0 2579 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 MAP1BP46821 2468 aaKnown RBP17.42■□□□□ 0.38
LIG1-205ENST00000593425 LNP1A1A4G5 178 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 CLDN5O00501 218 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 STX6O43752 255 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 PTPN1P18031 435 aaKnown RBP17.42■□□□□ 0.38
LIG1-205ENST00000593425 SLC6A11P48066 632 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 CYP2J2P51589 502 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 DHCR24Q15392 516 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 CRY1Q16526 586 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 WDR72Q3MJ13 1102 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 TMEM92Q6UXU6 159 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 NELFCDQ8IXH7 590 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 ADGRG2Q8IZP9 1017 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 CCDC26Q8TAB7 109 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 SCFD1Q8WVM8 642 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 ZNF516Q92618 1163 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 INTS4Q96HW7 963 aaKnown RBP17.42■□□□□ 0.38
LIG1-205ENST00000593425 FNBP1Q96RU3 617 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 LRRC27Q9C0I9 530 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 EHD2Q9NZN4 543 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 ABCA7Q8IZY2 2146 aa17.42■□□□□ 0.38
LIG1-205ENST00000593425 C4orf47A7E2U8 309 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 PATE3B3GLJ2 98 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 SPTLC2O15270 562 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 CASP1P29466 404 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 PPP3CCP48454 512 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 TNNC1P63316 161 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 SHC2P98077 582 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 USP39Q53GS9 565 aaKnown RBP17.41■□□□□ 0.38
LIG1-205ENST00000593425 TDRD10Q5VZ19 366 aaKnown RBP17.41■□□□□ 0.38
LIG1-205ENST00000593425 PSAPL1Q6NUJ1 521 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 SHC4Q6S5L8 630 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 ALLCQ8N6M5 410 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 B3GNT5Q9BYG0 378 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 ELOVL4Q9GZR5 314 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 CUEDC2Q9H467 287 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 CFAP97Q9P2B7 532 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 ZFHX4Q86UP3 3567 aa17.41■□□□□ 0.38
LIG1-205ENST00000593425 GIPC1O14908 333 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 PPP6R2O75170 966 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 MBL2P11226 248 aaPredicted RBP17.4■□□□□ 0.38
LIG1-205ENST00000593425 MYL6P60660 151 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 MRPS21P82921 87 aaKnown RBP17.4■□□□□ 0.38
LIG1-205ENST00000593425 EHHADHQ08426 723 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 CNNM4Q6P4Q7 775 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 RHBDF2Q6PJF5 856 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 C11orf74Q86VG3 221 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 TTC30AQ86WT1 665 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 KIAA1958Q8N8K9 716 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 IL17RCQ8NAC3 791 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 XXYLT1Q8NBI6 393 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 TXNDC5Q8NBS9 432 aaKnown RBP17.4■□□□□ 0.38
LIG1-205ENST00000593425 B3GALNT2Q8NCR0 500 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 SLITRK1Q96PX8 696 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 PNKPQ96T60 521 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 C7orf25Q9BPX7 421 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 XYLT2Q9H1B5 865 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 ZDHHC4Q9NPG8 344 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 TFIP11Q9UBB9 837 aaKnown RBP17.4■□□□□ 0.38
LIG1-205ENST00000593425 NXF1Q9UBU9 619 aaKnown RBP17.4■□□□□ 0.38
LIG1-205ENST00000593425 UBE4BO95155 1302 aa17.4■□□□□ 0.38
LIG1-205ENST00000593425 PLXND1Q9Y4D7 1925 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 A8MXQ7 604 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 SGK1O00141 431 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 SLC9A3R1O14745 358 aaPredicted RBP17.39■□□□□ 0.37
LIG1-205ENST00000593425 KAT7O95251 611 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 KLF8O95600 359 aaPredicted RBP17.39■□□□□ 0.37
LIG1-205ENST00000593425 STAU1O95793 577 aaKnown RBP17.39■□□□□ 0.37
LIG1-205ENST00000593425 CENPBP07199 599 aaPredicted RBP17.39■□□□□ 0.37
LIG1-205ENST00000593425 FAM163BP0C2L3 166 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 TIE1P35590 1138 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 CASP4P49662 377 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 NOVA1P51513 510 aaKnown RBP17.39■□□□□ 0.37
LIG1-205ENST00000593425 AMPD3Q01432 767 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 KDSRQ06136 332 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 UNC13DQ70J99 1090 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 CYP2U1Q7Z449 544 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 NUP93Q8N1F7 819 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 OLIG1Q8TAK6 271 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 RLN3Q8WXF3 142 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 ELMO3Q96BJ8 720 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 ZFRQ96KR1 1074 aaKnown RBP17.39■□□□□ 0.37
LIG1-205ENST00000593425 KCNK16Q96T55 309 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 BLZF1Q9H2G9 400 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 SMYD3Q9H7B4 428 aa17.39■□□□□ 0.37
LIG1-205ENST00000593425 COCHO43405 550 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 APODP05090 189 aa17.38■□□□□ 0.37
LIG1-205ENST00000593425 ADH5P11766 374 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms