RNA–Protein interactions for RNA: ENST00000593104.5

PRKCSH-220, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-220ENST00000593104 GAP43P17677 238 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 ABCD1P33897 745 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 STAT6P42226 847 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 WASP42768 502 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 MAGEA11P43364 429 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 RESTQ13127 1097 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 NR1H3Q13133 447 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 TRIM61Q5EBN2 209 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 DAB2IPQ5VWQ8 1189 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 RHBDF2Q6PJF5 856 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 C4orf50Q6ZRC1 276 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 LIMS2Q7Z4I7 341 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 BRAPQ7Z569 592 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 ADGRG2Q8IZP9 1017 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 OR6B3Q8NGW1 331 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 FUBP3Q96I24 572 aaKnown RBP eCLIP11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 ANKRD36BP1Q96IX9 119 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 TRIM9Q9C026 710 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 CD93Q9NPY3 652 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 TMEM9BQ9NQ34 198 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 FOXD4L1Q9NU39 408 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 TRPM5Q9NZQ8 1165 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 SEL1LQ9UBV2 794 aa11.96□□□□□ -0.49
PRKCSH-220ENST00000593104 FRYQ5TBA9 3013 aa11.96□□□□□ -0.5
PRKCSH-220ENST00000593104 LAMA1P25391 3075 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 TCRBV21S2A2A0A5A6 115 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 CLIC2O15247 247 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 HYAL3O43820 417 aaPredicted RBP11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 KAT7O95251 611 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 LDHAP00338 332 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 OAS1P00973 400 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 TNNC2P02585 160 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 DLATP10515 647 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 WARSP23381 471 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 ANXA13P27216 316 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 CASP1P29466 404 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 PGFP49763 221 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 LY6G5CQ5SRR4 150 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 PGBD3Q8N328 593 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 OLIG1Q8TAK6 271 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 SPATA17Q96L03 361 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 USP28Q96RU2 1077 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 KCNK16Q96T55 309 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 B3GNT5Q9BYG0 378 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 ADAM33Q9BZ11 813 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 ARHGEF4Q9NR80 690 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 OLFML3Q9NRN5 406 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 HSPBP1Q9NZL4 362 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 BCCIPQ9P287 314 aaKnown RBP eCLIP11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 HCN2Q9UL51 889 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 SRPRBQ9Y5M8 271 aaKnown RBP11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 PI4KAP42356 2102 aa11.95□□□□□ -0.5
PRKCSH-220ENST00000593104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 OLFM2O95897 454 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 IRF1P10914 325 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 TCF3P15923 654 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 ENGP17813 658 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 ITPKAP23677 461 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 P2RY2P41231 377 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 KIR2DL1P43626 348 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 FAM193AP78312 1265 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 SLC7A9P82251 487 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 MYO1EQ12965 1108 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 ORC1Q13415 861 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 MAP7D1Q3KQU3 841 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 VSTM1Q6UX27 236 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 TRAPPC11Q7Z392 1133 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 MIB1Q86YT6 1006 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 NELFCDQ8IXH7 590 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 PHTF2Q8N3S3 785 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 SCAMP5Q8TAC9 235 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 MYCBPAPQ8TBZ2 947 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 SPATA18Q8TC71 538 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 GATA6Q92908 595 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 EXOC4Q96A65 974 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 CCDC127Q96BQ5 260 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 PNKPQ96T60 521 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 TTLL2Q9BWV7 592 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 GZF1Q9H116 711 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 SLC6A17Q9H1V8 727 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 SMYD3Q9H7B4 428 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 CHORDC1Q9UHD1 332 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 KLK13Q9UKR3 277 aa11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.94□□□□□ -0.5
PRKCSH-220ENST00000593104 ZNF233A6NK53 670 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 TRIM66O15016 1216 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 MAP3K13O43283 966 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 COCHO43405 550 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 APODP05090 189 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 CFIP05156 583 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 ADH5P11766 374 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 PTPN1P18031 435 aaKnown RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 GNL1P36915 607 aaPredicted RBP11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 TXLNAP40222 546 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 CASP4P49662 377 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 CYP2J2P51589 502 aa11.93□□□□□ -0.5
PRKCSH-220ENST00000593104 CDH8P55286 799 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms