RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 FBXO43Q4G163 708 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 NUP93Q8N1F7 819 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 CD101Q93033 1021 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 LINC00597Q9H2U6 94 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 KCTD10Q9H3F6 313 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 DLL3Q9NYJ7 618 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 HPSEQ9Y251 543 aa17.17■□□□□ 0.34
CIRBP-241ENST00000593048 PRR5-ARHGAP8B1AHC4 643 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 LEFTY2O00292 366 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 RTN3O95197 1032 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-241ENST00000593048 NFATC1O95644 943 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 RETP07949 1114 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 TCF3P15923 654 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 YWHAQP27348 245 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 HOXA6P31267 233 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 NDUFA8P51970 172 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 CACNA2D1P54289 1103 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 DLG4P78352 724 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 CLDN10P78369 228 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 ARHGAP8P85298 464 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 LMNB2Q03252 620 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 SGSM1Q2NKQ1 1148 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 PKN3Q6P5Z2 889 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 WDR5BQ86VZ2 330 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 ELMO3Q96BJ8 720 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 CHAMP1Q96JM3 812 aa17.16■□□□□ 0.34
CIRBP-241ENST00000593048 SCAND2PQ9GZW5 306 aaPredicted RBP17.16■□□□□ 0.34
CIRBP-241ENST00000593048 FBRSL1Q9HCM7 1045 aaKnown RBP17.16■□□□□ 0.34
CIRBP-241ENST00000593048 ZNF638Q14966 1978 aaKnown RBP17.15■□□□□ 0.34
CIRBP-241ENST00000593048 VNN1O95497 513 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 MBL2P11226 248 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-241ENST00000593048 TRIM21P19474 475 aaKnown RBP17.15■□□□□ 0.34
CIRBP-241ENST00000593048 PXNP49023 591 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-241ENST00000593048 SLC7A9P82251 487 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 NAIF1Q69YI7 327 aaPredicted RBP17.15■□□□□ 0.34
CIRBP-241ENST00000593048 CCDC26Q8TAB7 109 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 TMC2Q8TDI7 906 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 TMEM174Q8WUU8 243 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 FBXO32Q969P5 355 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 RNF38Q9H0F5 515 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 LMBRD1Q9NUN5 540 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 SMPD4Q9NXE4 827 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 CDV3Q9UKY7 258 aaKnown RBP17.15■□□□□ 0.34
CIRBP-241ENST00000593048 CPQQ9Y646 472 aa17.15■□□□□ 0.34
CIRBP-241ENST00000593048 DENND4CQ5VZ89 1909 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 SLC9A3R1O14745 358 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-241ENST00000593048 IKBKBO14920 756 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 CCDC192P0DO97 292 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 HOXC13P31276 330 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 PIK3CAP42336 1068 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 ZACNQ401N2 412 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 SV2AQ7L0J3 742 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 ACOT1Q86TX2 421 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 FAM35AQ86V20 835 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 RPLP0P6Q8NHW5 317 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 TAF4BQ92750 862 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 SMARCD1Q96GM5 515 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 CCDC34Q96HJ3 373 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 KCNK16Q96T55 309 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 PARD6AQ9NPB6 346 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 DMAP1Q9NPF5 467 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-241ENST00000593048 TMEM30AQ9NV96 361 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 CHORDC1Q9UHD1 332 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-241ENST00000593048 MAPK8IP1Q9UQF2 711 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 OBSL1O75147 1896 aa17.14■□□□□ 0.33
CIRBP-241ENST00000593048 KIF26AQ9ULI4 1882 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-241ENST00000593048 LRP3O75074 770 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 AP1G2O75843 785 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 RHOBTB3O94955 611 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 PRR29P0C7W0 189 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 KRT13P13646 458 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 NR2F2P24468 414 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 VAMP7P51809 220 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 ZXDBP98169 803 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 FILIP1Q7Z7B0 1213 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 DDX42Q86XP3 938 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■□□ 17.9
CIRBP-241ENST00000593048 CAMKK1Q8N5S9 505 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 OVCA2Q8WZ82 227 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 IMPG2Q9BZV3 1241 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 SDCBP2Q9H190 292 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.13■□□□□ 0.334e-7■■■■■ 57
CIRBP-241ENST00000593048 CFAP97Q9P2B7 532 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 TRAF3IP3Q9Y228 551 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 CACNA1BQ00975 2339 aa17.13■□□□□ 0.33
CIRBP-241ENST00000593048 CCDC163A0A0D9SF12 145 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 A0A1W2PQ27 194 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 A0A1W2PQ64 194 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 A0A1W2PQD8 194 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 RPP40O75818 363 aaKnown RBP17.12■□□□□ 0.33
CIRBP-241ENST00000593048 OAS1P00973 400 aaKnown RBP17.12■□□□□ 0.33
CIRBP-241ENST00000593048 HLA-DRAP01903 254 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 TGM1P22735 817 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 RPL13P26373 211 aaKnown RBP17.12■□□□□ 0.33
CIRBP-241ENST00000593048 NDST1P52848 882 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 SLC5A3P53794 718 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 DPYDQ12882 1025 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 HECTD3Q5T447 861 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 SPOPLQ6IQ16 392 aa17.12■□□□□ 0.33
CIRBP-241ENST00000593048 KRBA2Q6ZNG9 492 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms