RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 GEMIN4P57678 1058 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 GPX6P59796 221 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 MMRN1Q13201 1228 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 KRT81Q14533 505 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 NOMO1Q15155 1222 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 PKN2Q16513 984 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 C15orf59Q2T9L4 293 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 FNBP1LQ5T0N5 605 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 SH3PXD2AQ5TCZ1 1133 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 TRNP1Q6NT89 227 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 DARS2Q6PI48 645 aaKnown RBP17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 SPATA21Q7Z572 469 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 MAP7D3Q8IWC1 876 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 FETUBQ9UGM5 382 aa17.33■□□□□ 0.36
PRKCSH-217ENST00000592741 CCL15-CCL14A0A0B4J2E2 113 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 E7ESA3 106 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SPAG7O75391 227 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 RASSF9O75901 435 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 YBX3P16989 372 aaKnown RBP eCLIP17.32■□□□□ 0.365e-10■■□□□ 12.1
PRKCSH-217ENST00000592741 DESP17661 470 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 RGS7P49802 495 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 GTF2A2P52657 109 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 BASP1P80723 227 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 GAD2Q05329 585 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 DPYSL3Q14195 570 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 ZKSCAN8Q15776 578 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 CCL15Q16663 113 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 CDO1Q16878 200 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 KIZQ2M2Z5 673 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 CYP4V2Q6ZWL3 525 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SUGP1Q8IWZ8 645 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 C12orf29Q8N999 325 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SNX27Q96L92 541 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 MRPL45Q9BRJ2 306 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 GCOM2Q9BZD3 368 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SNTG2Q9NY99 539 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 XPO7Q9UIA9 1087 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 ZMYND8Q9ULU4 1186 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SLC12A4Q9UP95 1085 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SNX9Q9Y5X1 595 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 CLUHO75153 1309 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 RRN3P2A6NIE6 340 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 UNCXA6NJT0 531 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 GRAP2O75791 330 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 STIP1P31948 543 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 YARSP54577 528 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SNX16P57768 344 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 RNASELQ05823 741 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 PDK2Q15119 407 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 KLHL38Q2WGJ6 581 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 PPP1R26Q5T8A7 1209 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 SLC27A1Q6PCB7 646 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 CATSPER4Q7RTX7 472 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 GPR142Q7Z601 462 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 PDIK1LQ8N165 341 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 TAB3Q8N5C8 712 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 FBXO36Q8NEA4 188 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 BEST2Q8NFU1 509 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 PIWIL1Q96J94 861 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 MAML3Q96JK9 1138 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 PAIP2Q9BPZ3 127 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 RABGEF1Q9UJ41 708 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 ARL2BPQ9Y2Y0 163 aa17.32■□□□□ 0.36
PRKCSH-217ENST00000592741 TMEM63AO94886 807 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 TSHRP16473 764 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 WDR4P57081 412 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 XRCC4Q13426 336 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 GRB14Q14449 540 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 SPARCL1Q14515 664 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 MSS51Q4VC12 460 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 BOLA3Q53S33 107 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 OLFML1Q6UWY5 402 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 NPNTQ6UXI9 565 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 ACOT1Q86TX2 421 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 SESTD1Q86VW0 696 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 GRAMD1AQ96CP6 724 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 MRRFQ96E11 262 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 MS4A4AQ96JQ5 239 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 ADAMTS10Q9H324 1103 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 ABHD16BQ9H3Z7 469 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 ZNF408Q9H9D4 720 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 ABCF3Q9NUQ8 709 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 SETD4Q9NVD3 440 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 HAUS2Q9NVX0 235 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.366e-6■□□□□ 10.3
PRKCSH-217ENST00000592741 HESX1Q9UBX0 185 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 GINS2Q9Y248 185 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 KAT6AQ92794 2004 aa17.31■□□□□ 0.36
PRKCSH-217ENST00000592741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 TCRBV7S3A2A0A539 114 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 H7C0C1 242 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ASMTLO95671 621 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ATP2A2P16615 1042 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 TAC1P20366 129 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ATP5OP48047 213 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 CDC42EP1Q00587 391 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 SLC6A3Q01959 620 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 ACVR2BQ13705 512 aa17.3■□□□□ 0.36
PRKCSH-217ENST00000592741 BBS9Q3SYG4 887 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms