RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	ZMIZ1	Q9ULJ6	1067 aa		19.52	■□□□□ 0.72
CIRBP-238	ENST00000592412	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	19.52	■□□□□ 0.72
CIRBP-238	ENST00000592412	CPQ	Q9Y646	472 aa		19.52	■□□□□ 0.72
CIRBP-238	ENST00000592412		F8VP50	259 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	CSRP1	P21291	193 aa	Known RBP	19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	P2RY2	P41231	377 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	DHPS	P49366	369 aa	Predicted RBP	19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	PDE6C	P51160	858 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	MRPS21	P82921	87 aa	Known RBP	19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	CYP27A1	Q02318	531 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	EMC10	Q5UCC4	262 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	RHBDF2	Q6PJF5	856 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	KDF1	Q8NAX2	398 aa	Predicted RBP	19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	TXNDC5	Q8NBS9	432 aa	Known RBP	19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	MYCBPAP	Q8TBZ2	947 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	HPS3	Q969F9	1004 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	PANK2	Q9BZ23	570 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	ZDHHC4	Q9NPG8	344 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	TMEM74B	Q9NUR3	256 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	PANK4	Q9NVE7	773 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	MBD1	Q9UIS9	605 aa	Predicted RBP	19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	CACNA1E	Q15878	2313 aa		19.51	■□□□□ 0.71
CIRBP-238	ENST00000592412	MYOF	Q9NZM1	2061 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	VPS37C	A5D8V6	355 aa	Predicted RBP	19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	ADAM23	O75077	832 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	CST3	P01034	146 aa	Predicted RBP	19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	CEACAM1	P13688	526 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	PTGER3	P43115	390 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	KIR2DL1	P43626	348 aa	Predicted RBP	19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	REST	Q13127	1097 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	MAPRE1	Q15691	268 aa	Known RBP	19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	MDH1B	Q5I0G3	518 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	PHTF2	Q8N3S3	785 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	KIAA1958	Q8N8K9	716 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	PIGK	Q92643	395 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	C8orf48	Q96LL4	319 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	EVL	Q9UI08	416 aa	Predicted RBP	19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412	PLXND1	Q9Y4D7	1925 aa		19.5	■□□□□ 0.71
CIRBP-238	ENST00000592412		A0A0A0MRY4	1105 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	TRIM66	O15016	1216 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	KAT7	O95251	611 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	KLF8	O95600	359 aa	Predicted RBP	19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	TNNC2	P02585	160 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	TIE1	P35590	1138 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	EIF2D	P41214	584 aa	Known RBP	19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	TAF10	Q12962	218 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	DUOXA2	Q1HG44	320 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	MAP7D1	Q3KQU3	841 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	CCDC73	Q6ZRK6	1079 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	TRAPPC11	Q7Z392	1133 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	TTC30A	Q86WT1	665 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	WDR49	Q8IV35	697 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	DEFB124	Q8NES8	71 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	GATA6	Q92908	595 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	ZFR	Q96KR1	1074 aa	Known RBP	19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	PNKP	Q96T60	521 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	ADAM33	Q9BZ11	813 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	GZF1	Q9H116	711 aa	Predicted RBP	19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	DPEP3	Q9H4B8	488 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	HSPBP1	Q9NZL4	362 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	CFAP97	Q9P2B7	532 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	GON4L	Q3T8J9	2241 aa		19.49	■□□□□ 0.71
CIRBP-238	ENST00000592412	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	ZNF233	A6NK53	670 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	KIAA0391	O15091	583 aa	Known RBP	19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	TACC1	O75410	805 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	ANXA13	P27216	316 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	TXLNA	P40222	546 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	STAT6	P42226	847 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	CEBPZ	Q03701	1054 aa	Known RBP	19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	CUL4A	Q13619	759 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	TRIM61	Q5EBN2	209 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	ARMCX6	Q7L4S7	300 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	TMEFF1	Q8IYR6	380 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	MMS19	Q96T76	1030 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	SCNM1	Q9BWG6	230 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	ZNF518B	Q9C0D4	1074 aa		19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	ANKRD11	Q6UB99	2663 aa	Predicted RBP	19.48	■□□□□ 0.71
CIRBP-238	ENST00000592412	TNFRSF10B	O14763	440 aa		19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	GNL1	P36915	607 aa	Predicted RBP	19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	PPP3CC	P48454	512 aa		19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	KDSR	Q06136	332 aa		19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	UAP1L1	Q3KQV9	507 aa		19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	WHAMM	Q8TF30	809 aa		19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	HCN2	Q9UL51	889 aa		19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	MORC2	Q9Y6X9	1032 aa	Predicted RBP	19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	ATXN2	Q99700	1313 aa	Known RBP	19.47	■□□□□ 0.71
CIRBP-238	ENST00000592412	CLDN5	O00501	218 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	SLC9A3R1	O14745	358 aa	Predicted RBP	19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	TGFB1I1	O43294	461 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	ALDH1A2	O94788	518 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	ABL1	P00519	1130 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	ADH5	P11766	374 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	PTPN1	P18031	435 aa	Known RBP	19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	GRIA2	P42262	883 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	SURF1	Q15526	300 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	HSF5	Q4G112	596 aa	Predicted RBP	19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	LY6G5C	Q5SRR4	150 aa		19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	PEAR1	Q5VY43	1037 aa	Predicted RBP	19.46	■□□□□ 0.71
CIRBP-238	ENST00000592412	LPCAT2	Q7L5N7	544 aa		19.46	■□□□□ 0.71

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