RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TMEM154Q6P9G4 183 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 C4orf33Q8N1A6 199 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 TRPM4Q8TD43 1214 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 DTX3LQ8TDB6 740 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 CDK5RAP1Q96SZ6 601 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 CYP3A43Q9HB55 503 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 SLC40A1Q9NP59 571 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 SLC25A13Q9UJS0 675 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 C3P01024 1663 aa13.81□□□□□ -0.2
SMARCA4-216ENST00000591545 CCDC85CA6NKD9 419 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 GOLGA8RI6L899 631 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 CTDNEP1O95476 244 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 EPHB2P29323 1055 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ETFBP38117 255 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 CARSP49589 748 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 KPNA1P52294 538 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 BCAT1P54687 386 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 FBXW4P57775 412 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 TRIP10Q15642 601 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 WLSQ5T9L3 541 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ACOT1Q86TX2 421 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 TEKT4Q8WW24 435 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 WNK4Q96J92 1243 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 STN1Q9H668 368 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DDX28Q9NUL7 540 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 TSR3Q9UJK0 312 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 FZD1Q9UP38 647 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 SATB2Q9UPW6 733 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ZMYM2Q9UBW7 1377 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 CASTOR2A6NHX0 329 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 B2RBV5 119 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 POLBP06746 335 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 COILP38432 576 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 PDAP1Q13442 181 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 PTPAQ15257 358 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 FBXO47Q5MNV8 452 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ADNPQ9H2P0 1102 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 GTF3C4Q9UKN8 822 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ALG6Q9Y672 507 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 A0A1B0GW55 424 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 M0QYT0 321 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DUX4L2P0CJ85 424 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DUX4L3P0CJ86 424 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DUX4L4P0CJ87 422 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DUX4L5P0CJ88 424 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DUX4L6P0CJ89 424 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DUX4L7P0CJ90 424 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ENO3P13929 434 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ADRM1Q16186 407 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 KBTBD12Q3ZCT8 623 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 TRIM60Q495X7 471 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 OVOS1Q6IE37 1185 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ADCK2Q7Z695 626 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 WDR49Q8IV35 697 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 TMC2Q8TDI7 906 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 PTPRN2Q92932 1015 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 E2F7Q96AV8 911 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 MANSC1Q9H8J5 431 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DUX4Q9UBX2 424 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 PCDHB5Q9Y5E4 795 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 PRPF4O43172 522 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 MAP3K13O43283 966 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ASS1P00966 412 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 POMCP01189 267 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 ITGA8P53708 1063 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DEFA1P59665 94 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 DEFA3P59666 94 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 MRPS15P82914 257 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 GRIN1Q05586 938 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 PLD3Q8IV08 490 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 HASPINQ8TF76 798 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 THTPAQ9BU02 230 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 METTL5Q9NRN9 209 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 PCMTD2Q9NV79 361 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 CLCA2Q9UQC9 943 aa13.8□□□□□ -0.2
SMARCA4-216ENST00000591545 SYNCRIPO60506 623 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 TLR2O60603 784 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 GEMIN4P57678 1058 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 FIGNQ5HY92 759 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 RFX8Q6ZV50 586 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 CBWD2Q8IUF1 395 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 ENGASEQ8NFI3 743 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 CHST12Q9NRB3 414 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 LATS2Q9NRM7 1088 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 KLHL11Q9NVR0 708 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 CAPN15O75808 1086 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 BEX3Q00994 111 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 LVRNQ6Q4G3 990 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 ZFPM1Q8IX07 1006 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 FEZF2Q8TBJ5 459 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 BHMTQ93088 406 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 RIC8BQ9NVN3 520 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 ZNF711Q9Y462 761 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 MROH7Q68CQ1 1323 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 LOC102724159A0A0B4J2E5 919 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 H2AFYO75367 372 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 PLA2G4AP47712 749 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 WASHC5Q12768 1159 aa13.79□□□□□ -0.2
SMARCA4-216ENST00000591545 MRPL28Q13084 256 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms