RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 ITGB1P05556 798 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 CXCR5P32302 372 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 RFC1P35251 1148 aaPredicted RBP13.63□□□□□ -0.23
PTBP1-216ENST00000590887 GRIK1P39086 918 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 MAGEA11P43364 429 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 GATMP50440 423 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 RNASE9P60153 205 aaKnown RBP13.63□□□□□ -0.23
PTBP1-216ENST00000590887 RPL7AP62424 266 aaKnown RBP13.63□□□□□ -0.23
PTBP1-216ENST00000590887 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
PTBP1-216ENST00000590887 SMC1AQ14683 1233 aaKnown RBP13.63□□□□□ -0.23
PTBP1-216ENST00000590887 LONRF2Q1L5Z9 754 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 KCNT2Q6UVM3 1135 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 OLFML1Q6UWY5 402 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 SCUBE3Q8IX30 993 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 KATNAL2Q8IYT4 538 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 FIBCD1Q8N539 461 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 EXD1Q8NHP7 514 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 CD101Q93033 1021 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 IGSF21Q96ID5 467 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 PSMB7Q99436 277 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 CWH43Q9H720 699 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 COMMD8Q9NX08 183 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.63□□□□□ -0.231e-7■■■□□ 18.4
PTBP1-216ENST00000590887 CHORDC1Q9UHD1 332 aaPredicted RBP13.63□□□□□ -0.23
PTBP1-216ENST00000590887 RWDD3Q9Y3V2 267 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 BACE2Q9Y5Z0 518 aa13.63□□□□□ -0.23
PTBP1-216ENST00000590887 TSC2P49815 1807 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 FAM170AA1A519 330 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 C2CD4BA6NLJ0 364 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 CLDN5O00501 218 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 CAPN9O14815 690 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 ZNF185O15231 689 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 PAPSS1O43252 624 aaPredicted RBP13.62□□□□□ -0.23
PTBP1-216ENST00000590887 HCRTO43612 131 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 ACRP10323 421 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 CPB1P15086 417 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 BDNFP23560 247 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 PTPN9P43378 593 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 PEX5P50542 639 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 TKTL1P51854 596 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 RPL10AP62906 217 aaKnown RBP13.62□□□□□ -0.23
PTBP1-216ENST00000590887 YWHAZP63104 245 aaKnown RBP13.62□□□□□ -0.23
PTBP1-216ENST00000590887 SLC39A12Q504Y0 691 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 BOLA3Q53S33 107 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 KIAA0319Q5VV43 1072 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 PAQR9Q6ZVX9 377 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 OTOP2Q7RTS6 562 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 MAP7D3Q8IWC1 876 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 C7orf61Q8IZ16 206 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 ARHGAP18Q8N392 663 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 GPR161Q8N6U8 529 aaKnown RBP13.62□□□□□ -0.23
PTBP1-216ENST00000590887 SPATA4Q8NEY3 305 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 CCDC26Q8TAB7 109 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 COG1Q8WTW3 980 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 RXFP2Q8WXD0 754 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 RUBCNQ92622 972 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 BADQ92934 168 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 FAM149B1Q96BN6 582 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 C8orf48Q96LL4 319 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 RNPC3Q96LT9 517 aaKnown RBP13.62□□□□□ -0.23
PTBP1-216ENST00000590887 TBCBQ99426 244 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 RTP3Q9BQQ7 232 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 GOLPH3Q9H4A6 298 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 FBXO44Q9H4M3 255 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 POPDC2Q9HBU9 364 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.62□□□□□ -0.23
PTBP1-216ENST00000590887 ARGLU1Q9NWB6 273 aaPredicted RBP13.62□□□□□ -0.23
PTBP1-216ENST00000590887 MARCH5Q9NX47 278 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 TMEM59LQ9UK28 342 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 MAFFQ9ULX9 164 aa13.62□□□□□ -0.23
PTBP1-216ENST00000590887 KRIT1O00522 736 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 PRPSAP2O60256 369 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 TADA3O75528 432 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 F9P00740 461 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 SOD2P04179 222 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 ITGB8P26012 769 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 NOS2P35228 1153 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 MATKP42679 507 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 TUFMP49411 452 aaKnown RBP13.61□□□□□ -0.23
PTBP1-216ENST00000590887 ADIGQ0VDE8 80 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 GPR17Q13304 367 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 RAB41Q5JT25 222 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 TEX35Q5T0J7 233 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 ZNF365Q70YC5 407 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 SND1Q7KZF4 910 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTBP1-216ENST00000590887 BEND5Q7L4P6 421 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 DDX53Q86TM3 631 aaKnown RBP13.61□□□□□ -0.23
PTBP1-216ENST00000590887 CCDC50Q8IVM0 306 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 MMGT1Q8N4V1 131 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 OR10T2Q8NGX3 314 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 HERVK_113Q902F9 699 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 PKMYT1Q99640 499 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 SMOQ99835 787 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 HERC2P3Q9BVR0 1158 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 GPR62Q9BZJ7 368 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 HSFX1Q9UBD0 423 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 FEZ2Q9UHY8 353 aaPredicted RBP13.61□□□□□ -0.23
PTBP1-216ENST00000590887 SLC4A7Q9Y6M7 1214 aa13.61□□□□□ -0.23
PTBP1-216ENST00000590887 NT5C1B-RDH14C9J2C7 533 aa13.6□□□□□ -0.23
PTBP1-216ENST00000590887 TULP2O00295 520 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms