RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 UCHL3P15374 230 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 ATF6P18850 670 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 ZNF132P52740 706 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 MFAP3P55082 362 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 YWHAEP62258 255 aaKnown RBP22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 ARHGAP8P85298 464 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 SMARCB1Q12824 385 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 RBBP8NLQ8NC74 664 aaPredicted RBP22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 ZBTB44Q8NCP5 570 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 SLC2A14Q8TDB8 520 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 FGF13Q92913 245 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 HEXIM2Q96MH2 286 aaKnown RBP22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 ZSWIM1Q9BR11 485 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 GPR88Q9GZN0 384 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 HCFC1R1Q9NWW0 138 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 ZSCAN32Q9NX65 697 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 CEP72Q9P209 647 aa22.77■■□□□ 1.24
R3HDM4-206ENST00000590454 AP5Z1O43299 807 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 ADORA2BP29275 332 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 UBASH3AP57075 661 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 NTHL1P78549 312 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 LMNB2Q03252 620 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 MAPRE1Q15691 268 aaKnown RBP22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 DDR2Q16832 855 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 CFAP221Q4G0U5 840 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 FILIP1LQ4L180 1135 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 PPP1R26Q5T8A7 1209 aaPredicted RBP22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 C4orf50Q6ZRC1 276 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 FAM35AQ86V20 835 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 TTC39CQ8N584 583 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 GIPC2Q8TF65 315 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 TFAP2BQ92481 460 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 SHC3Q92529 594 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 PCMTD1Q96MG8 357 aaPredicted RBP22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 NELL2Q99435 816 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 MED10Q9BTT4 135 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 FAM124BQ9H5Z6 455 aaPredicted RBP22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 ABCB6Q9NP58 842 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 LTB4R2Q9NPC1 389 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 ACP6Q9NPH0 428 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 CNTN6Q9UQ52 1028 aa22.76■■□□□ 1.23
R3HDM4-206ENST00000590454 FOXN3O00409 490 aaPredicted RBP22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 XYLBO75191 536 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 KRT5P13647 590 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 HOXA9P31269 272 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 RAPGEF1Q13905 1077 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 ENOSF1Q7L5Y1 443 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 SCN4BQ8IWT1 228 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 CYFIP2Q96F07 1278 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 FUBP3Q96I24 572 aaKnown RBP eCLIP22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 EPC1Q9H2F5 836 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 HSFX1Q9UBD0 423 aa22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 CDV3Q9UKY7 258 aaKnown RBP22.75■■□□□ 1.23
R3HDM4-206ENST00000590454 NRG2O14511 850 aaPredicted RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 NCAM2O15394 837 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 BEST1O76090 585 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 LRG1P02750 347 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 TUFMP49411 452 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 POLR2FP61218 127 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 DRAP1Q14919 205 aaPredicted RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 GPIHBP1Q8IV16 184 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 JAKMIP2Q96AA8 810 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 KCNK16Q96T55 309 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 HNRNPABQ99729 332 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 XPO4Q9C0E2 1151 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 DNMT3BQ9UBC3 853 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 SMG5Q9UPR3 1016 aaKnown RBP22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 CACNA1IQ9P0X4 2223 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 NOTCH4Q99466 2003 aa22.74■■□□□ 1.23
R3HDM4-206ENST00000590454 LILRB5O75023 590 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 CD19P15391 556 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 CD72P21854 359 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 BRD2P25440 801 aaKnown RBP22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 PBX1P40424 430 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 USP8P40818 1118 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 MAGEA11P43364 429 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 ALDH1A3P47895 512 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 RTL10Q7L3V2 364 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 HS6ST3Q8IZP7 471 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 ITFG1Q8TB96 612 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 NELL1Q92832 810 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 CLDN23Q96B33 292 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 SMOQ99835 787 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 RTKNQ9BST9 563 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 NLRC4Q9NPP4 1024 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 KRT82Q9NSB4 513 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 NCOR2Q9Y618 2525 aa22.73■■□□□ 1.23
R3HDM4-206ENST00000590454 WDR87Q6ZQQ6 2873 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 F8VP50 259 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 CYP26A1O43174 497 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 AP1G2O75843 785 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 PAEPP09466 180 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 GRIK1P39086 918 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 ARHGAP17Q68EM7 881 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 ZMIZ2Q8NF64 920 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 NEK11Q8NG66 645 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 FAM81BQ96LP2 452 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 KXD1Q9BQD3 176 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 STK33Q9BYT3 514 aa22.72■■□□□ 1.23
R3HDM4-206ENST00000590454 USP18Q9UMW8 372 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms