RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CCDC142Q17RM4 750 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 NSUN6Q8TEA1 469 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 OSCP1Q8WVF1 389 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 R3HDM2Q9Y2K5 976 aaKnown RBP15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 PCDHA3Q9Y5H8 950 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 SALL1Q9NSC2 1324 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 SMNDC1O75940 238 aaKnown RBP eCLIP15.13■□□□□ 0.011e-8■□□□□ 10.1
SMARCA4-214ENST00000589677 NPTXRO95502 500 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 IL12RB1P42701 662 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 ITGADQ13349 1161 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 SMTNL2Q2TAL5 461 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 SPOCD1Q6ZMY3 1216 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 PLEKHM3Q6ZWE6 761 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 SVOPQ8N4V2 548 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 TSPAN14Q8NG11 270 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 FAM84BQ96KN1 310 aaPredicted RBP15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 LRRC4BQ9NT99 713 aa15.13■□□□□ 0.01
SMARCA4-214ENST00000589677 BTNL10A8MVZ5 291 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 MFN2O95140 757 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 TRAF2Q12933 501 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 WDR72Q3MJ13 1102 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 ARMC4Q5T2S8 1044 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 GPAT2Q6NUI2 795 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 LRRC8DQ7L1W4 858 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SHCBP1Q8NEM2 672 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 FNIP1Q8TF40 1166 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 DUSP9Q99956 384 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 C9orf16Q9BUW7 83 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 TRPC7Q9HCX4 862 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 TIMMDC1Q9NPL8 285 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 ARMCX1Q9P291 453 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 VTI1BQ9UEU0 232 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 PTPRMP28827 1452 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 PTGER2P43116 358 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SULT1E1P49888 294 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 NDUFA5Q16718 116 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SLC10A5Q5PT55 438 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 NAPEPLDQ6IQ20 393 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SULF1Q8IWU6 871 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SYNE4Q8N205 404 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SCFD2Q8WU76 684 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 PLEKHA5Q9HAU0 1116 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 ADCY6O43306 1168 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 ADORA2BP29275 332 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SNX17Q15036 470 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 AGAP9Q5VTM2 703 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 RBM44Q6ZP01 1051 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SH3RF1Q7Z6J0 888 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 OR8H2Q8N162 312 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 EURLQ9NYK6 297 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 TUBGCP4Q9UGJ1 667 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 RSL24D1Q9UHA3 163 aaKnown RBP15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 DMTF1Q9Y222 760 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 NEXMIFQ5QGS0 1516 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 MEI4A8MW99 385 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 EVPLLA8MZ36 301 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 ASNSP08243 561 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 GTF2H1P32780 548 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SOX11P35716 441 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 MMP13P45452 471 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 PRKAA2P54646 552 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 DENND1BQ6P3S1 775 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 GADL1Q6ZQY3 521 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 PYDC1Q8WXC3 89 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 SEPT1Q8WYJ6 367 aa15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 ARIH1Q9Y4X5 557 aaPredicted RBP15.12■□□□□ 0.01
SMARCA4-214ENST00000589677 CSF1RP07333 972 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 RARAP10276 462 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 VAV1P15498 845 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 RPL10AP62906 217 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 TP53BP2Q13625 1128 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 ARMCX6Q7L4S7 300 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 DHFR2Q86XF0 187 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 BDH2Q9BUT1 245 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 DFFAO00273 331 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 EXTL3O43909 919 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 ZNF862O60290 1169 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 SHBGP04278 402 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 CATSPER4Q7RTX7 472 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 HDDC2Q7Z4H3 204 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 LINC00523Q86TU6 105 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 RTKN2Q8IZC4 609 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 ZCCHC9Q8N567 271 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 USP13Q92995 863 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 SRPK1Q96SB4 655 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 NMRK1Q9NWW6 199 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 TMEM161AQ9NX61 479 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 A0A0U1RQJ8 604 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 CAMTA2O94983 1202 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 S100A1P23297 94 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 CCNA1P78396 465 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 SLC5A9Q2M3M2 681 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 CCDC153Q494R4 210 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 MED15Q96RN5 788 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 IMPAD1Q9NX62 359 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 STK39Q9UEW8 545 aa15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 STX7O15400 261 aaKnown RBP15.11■□□□□ 0.01
SMARCA4-214ENST00000589677 NEDD8Q15843 81 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms