RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 SMAD2Q15796 467 aaKnown RBP23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 FIGNQ5HY92 759 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 TMC6Q7Z403 805 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 NOP9Q86U38 636 aaKnown RBP23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 PIGZQ86VD9 579 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 VSTM4Q8IW00 320 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 TCEAL4Q96EI5 215 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 CEP295NLQ96MC4 621 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 EHD2Q9NZN4 543 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 UXTQ9UBK9 157 aaPredicted RBP23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 CEP83Q9Y592 693 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 ANAPC1Q9H1A4 1944 aa23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 NUP210Q8TEM1 1887 aaPredicted RBP23.7■■□□□ 1.38
R3HDM4-205ENST00000589445 HELZP42694 1942 aaKnown RBP23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 FAM170AA1A519 330 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 XPO1O14980 1071 aaKnown RBP23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 RTN3O95197 1032 aaPredicted RBP23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 GYPCP04921 128 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 CFHP08603 1231 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 TPM1P09493 284 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 FERP16591 822 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 ZNF75DP51815 510 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 CYP4F8P98187 520 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 TRIM14Q14142 442 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 SMYD5Q6GMV2 418 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 ZNF397Q8NF99 534 aaPredicted RBP23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 SCAMP5Q8TAC9 235 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 ITFG1Q8TB96 612 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 SLC20A1Q8WUM9 679 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 FBXO32Q969P5 355 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 IQCDQ96DY2 449 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 TRMT2BQ96GJ1 504 aaKnown RBP23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 SLITRK6Q9H5Y7 841 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 DOCK8Q8NF50 2099 aa23.69■■□□□ 1.38
R3HDM4-205ENST00000589445 ZNF197O14709 1029 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 FGF19O95750 216 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 CDC25CP30307 473 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 CCR2P41597 374 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 EPHA5P54756 1037 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 SFMBT2Q5VUG0 894 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 FMNL3Q8IVF7 1028 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 TDRD5Q8NAT2 981 aaKnown RBP23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 SHKBP1Q8TBC3 707 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 RPGRIP1Q96KN7 1286 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 ATXN3LQ9H3M9 355 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 LRRC4Q9HBW1 653 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 PNPLA8Q9NP80 782 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 SEPT11Q9NVA2 429 aaKnown RBP23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 MYO6Q9UM54 1294 aa23.68■■□□□ 1.38
R3HDM4-205ENST00000589445 A0A1W2PQJ5 194 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 HHLA1C9JL84 531 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 PIK3R2O00459 728 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 TNFRSF10BO14763 440 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 CCDC172P0C7W6 258 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 YWHAQP27348 245 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 PLA2G4AP47712 749 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 ADIGQ0VDE8 80 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 TEAD2Q15562 447 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 PRSS36Q5K4E3 855 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 SIX6OS1Q8N1H7 587 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 C1orf131Q8NDD1 294 aaKnown RBP23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 NECAB3Q96P71 396 aaPredicted RBP23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 SLITRK1Q96PX8 696 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 TTLL2Q9BWV7 592 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 PHF7Q9BWX1 381 aaPredicted RBP23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 LRRC3Q9BY71 257 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 EDEM3Q9BZQ6 932 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 IL21Q9HBE4 155 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 ST7Q9NRC1 585 aa23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 NOCTQ9UK39 431 aaKnown RBP23.67■■□□□ 1.38
R3HDM4-205ENST00000589445 NRG2O14511 850 aaPredicted RBP23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 ABL1P00519 1130 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 MMEP08473 750 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 LCP1P13796 627 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 CASP14P31944 242 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 TAF10Q12962 218 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 MEA1Q16626 185 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 PKDCCQ504Y2 493 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 ARHGAP15Q53QZ3 475 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 E4F1Q66K89 784 aaPredicted RBP23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 GAREM2Q75VX8 874 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 FBXO44Q9H4M3 255 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 TRPC7Q9HCX4 862 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 GMIPQ9P107 970 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 PCDHGC3Q9UN70 934 aa23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 LUC7L2Q9Y383 392 aaKnown RBP23.66■■□□□ 1.38
R3HDM4-205ENST00000589445 TADA3O75528 432 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 TKTL1P51854 596 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 ZBED6P86452 979 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 TDRD12Q587J7 1177 aaKnown RBP23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 STXBP5Q5T5C0 1151 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 NPAS3Q8IXF0 933 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 MRPS31Q92665 395 aaKnown RBP23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 FGF13Q92913 245 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 MYRFLQ96LU7 910 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 AVENQ9NQS1 362 aaPredicted RBP23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 CAPN11Q9UMQ6 739 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 NR2E1Q9Y466 385 aa23.65■■□□□ 1.38
R3HDM4-205ENST00000589445 CDR2Q01850 454 aa23.64■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms